Protein–RNA interactions for Protein: Q9NZR4

VSX1, Visual system homeobox 1, humanhuman

Predicted RBP Predictions only

Length 365 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1Q9NZR4 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
VSX1Q9NZR4 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
VSX1Q9NZR4 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
VSX1Q9NZR4 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
VSX1Q9NZR4 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
VSX1Q9NZR4 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
VSX1Q9NZR4 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
VSX1Q9NZR4 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
VSX1Q9NZR4 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.53■□□□□ 0.56
VSX1Q9NZR4 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
VSX1Q9NZR4 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
VSX1Q9NZR4 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.53■□□□□ 0.56
VSX1Q9NZR4 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
VSX1Q9NZR4 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
VSX1Q9NZR4 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC18.53■□□□□ 0.56
VSX1Q9NZR4 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC18.53■□□□□ 0.56
VSX1Q9NZR4 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC18.53■□□□□ 0.56
VSX1Q9NZR4 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
VSX1Q9NZR4 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
VSX1Q9NZR4 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
VSX1Q9NZR4 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
VSX1Q9NZR4 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
VSX1Q9NZR4 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
VSX1Q9NZR4 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
VSX1Q9NZR4 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.52■□□□□ 0.56
VSX1Q9NZR4 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
VSX1Q9NZR4 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
VSX1Q9NZR4 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
VSX1Q9NZR4 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
VSX1Q9NZR4 POU5F1P4-201ENST00000413175 1085 ntBASIC18.52■□□□□ 0.56
VSX1Q9NZR4 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
VSX1Q9NZR4 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
VSX1Q9NZR4 AC008175.2-201ENST00000612840 297 ntBASIC18.52■□□□□ 0.56
VSX1Q9NZR4 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
VSX1Q9NZR4 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
VSX1Q9NZR4 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
VSX1Q9NZR4 LINC01521-201ENST00000504184 1943 ntBASIC18.52■□□□□ 0.56
VSX1Q9NZR4 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.52■□□□□ 0.56
VSX1Q9NZR4 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
VSX1Q9NZR4 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.52■□□□□ 0.55
VSX1Q9NZR4 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
VSX1Q9NZR4 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.52■□□□□ 0.55
VSX1Q9NZR4 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
VSX1Q9NZR4 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
VSX1Q9NZR4 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
VSX1Q9NZR4 FEM1AP1-201ENST00000431297 1995 ntBASIC18.51■□□□□ 0.55
VSX1Q9NZR4 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
VSX1Q9NZR4 AL157384.1-201ENST00000445995 2473 ntBASIC18.51■□□□□ 0.55
VSX1Q9NZR4 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.51■□□□□ 0.55
VSX1Q9NZR4 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
VSX1Q9NZR4 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
VSX1Q9NZR4 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.51■□□□□ 0.55
VSX1Q9NZR4 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
VSX1Q9NZR4 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.51■□□□□ 0.55
VSX1Q9NZR4 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.51■□□□□ 0.55
VSX1Q9NZR4 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
VSX1Q9NZR4 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
VSX1Q9NZR4 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
VSX1Q9NZR4 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
VSX1Q9NZR4 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
VSX1Q9NZR4 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
VSX1Q9NZR4 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
VSX1Q9NZR4 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
VSX1Q9NZR4 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
VSX1Q9NZR4 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
VSX1Q9NZR4 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
VSX1Q9NZR4 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.5■□□□□ 0.55
VSX1Q9NZR4 AC138907.5-202ENST00000569484 235 ntBASIC18.5■□□□□ 0.55
VSX1Q9NZR4 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC18.5■□□□□ 0.55
VSX1Q9NZR4 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
VSX1Q9NZR4 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.5■□□□□ 0.55
VSX1Q9NZR4 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
VSX1Q9NZR4 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
VSX1Q9NZR4 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
VSX1Q9NZR4 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
VSX1Q9NZR4 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
VSX1Q9NZR4 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.5■□□□□ 0.55
VSX1Q9NZR4 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.5■□□□□ 0.55
VSX1Q9NZR4 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
VSX1Q9NZR4 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
VSX1Q9NZR4 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
VSX1Q9NZR4 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
VSX1Q9NZR4 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
VSX1Q9NZR4 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.49■□□□□ 0.55
VSX1Q9NZR4 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
VSX1Q9NZR4 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
VSX1Q9NZR4 AK1-201ENST00000223836 736 ntTSL 3 BASIC18.49■□□□□ 0.55
VSX1Q9NZR4 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.49■□□□□ 0.55
VSX1Q9NZR4 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC18.49■□□□□ 0.55
VSX1Q9NZR4 LINC02228-203ENST00000641970 1355 ntBASIC18.49■□□□□ 0.55
VSX1Q9NZR4 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
VSX1Q9NZR4 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
VSX1Q9NZR4 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
VSX1Q9NZR4 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
VSX1Q9NZR4 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
VSX1Q9NZR4 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
VSX1Q9NZR4 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.49■□□□□ 0.55
VSX1Q9NZR4 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
VSX1Q9NZR4 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
VSX1Q9NZR4 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms