Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC17.23■□□□□ 0.35
LIN7CQ9NUP9 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LIN7CQ9NUP9 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC17.23■□□□□ 0.35
LIN7CQ9NUP9 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
LIN7CQ9NUP9 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LIN7CQ9NUP9 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
LIN7CQ9NUP9 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LIN7CQ9NUP9 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LIN7CQ9NUP9 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC17.23■□□□□ 0.35
LIN7CQ9NUP9 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LIN7CQ9NUP9 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC17.22■□□□□ 0.35
LIN7CQ9NUP9 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LIN7CQ9NUP9 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LIN7CQ9NUP9 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LIN7CQ9NUP9 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
LIN7CQ9NUP9 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LIN7CQ9NUP9 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LIN7CQ9NUP9 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LIN7CQ9NUP9 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LIN7CQ9NUP9 NME4-202ENST00000382940 766 ntTSL 3 BASIC17.22■□□□□ 0.35
LIN7CQ9NUP9 MFF-208ENST00000409616 1247 ntTSL 5 BASIC17.22■□□□□ 0.35
LIN7CQ9NUP9 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
LIN7CQ9NUP9 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LIN7CQ9NUP9 LGR4-203ENST00000480977 492 ntTSL 2 BASIC17.22■□□□□ 0.35
LIN7CQ9NUP9 AC012414.1-201ENST00000556676 535 ntBASIC17.22■□□□□ 0.35
LIN7CQ9NUP9 NME4-211ENST00000620944 1193 ntTSL 2 BASIC17.22■□□□□ 0.35
LIN7CQ9NUP9 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LIN7CQ9NUP9 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
LIN7CQ9NUP9 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC17.22■□□□□ 0.35
LIN7CQ9NUP9 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LIN7CQ9NUP9 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LIN7CQ9NUP9 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
LIN7CQ9NUP9 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LIN7CQ9NUP9 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LIN7CQ9NUP9 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
LIN7CQ9NUP9 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
LIN7CQ9NUP9 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LIN7CQ9NUP9 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LIN7CQ9NUP9 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LIN7CQ9NUP9 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LIN7CQ9NUP9 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LIN7CQ9NUP9 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LIN7CQ9NUP9 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LIN7CQ9NUP9 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LIN7CQ9NUP9 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LIN7CQ9NUP9 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LIN7CQ9NUP9 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LIN7CQ9NUP9 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
LIN7CQ9NUP9 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LIN7CQ9NUP9 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC17.21■□□□□ 0.35
LIN7CQ9NUP9 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC17.21■□□□□ 0.35
LIN7CQ9NUP9 AC006128.1-201ENST00000624704 1661 ntBASIC17.21■□□□□ 0.35
LIN7CQ9NUP9 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
LIN7CQ9NUP9 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LIN7CQ9NUP9 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC17.21■□□□□ 0.35
LIN7CQ9NUP9 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
LIN7CQ9NUP9 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC17.21■□□□□ 0.35
LIN7CQ9NUP9 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
LIN7CQ9NUP9 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
LIN7CQ9NUP9 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC17.21■□□□□ 0.35
LIN7CQ9NUP9 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC17.21■□□□□ 0.35
LIN7CQ9NUP9 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LIN7CQ9NUP9 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LIN7CQ9NUP9 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC17.21■□□□□ 0.35
LIN7CQ9NUP9 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LIN7CQ9NUP9 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LIN7CQ9NUP9 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LIN7CQ9NUP9 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC17.21■□□□□ 0.35
LIN7CQ9NUP9 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LIN7CQ9NUP9 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
LIN7CQ9NUP9 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
LIN7CQ9NUP9 MPST-204ENST00000404393 1329 ntTSL 5 BASIC17.21■□□□□ 0.34
LIN7CQ9NUP9 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
LIN7CQ9NUP9 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
LIN7CQ9NUP9 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC17.2■□□□□ 0.34
LIN7CQ9NUP9 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LIN7CQ9NUP9 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LIN7CQ9NUP9 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
LIN7CQ9NUP9 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LIN7CQ9NUP9 AK1-201ENST00000223836 736 ntTSL 3 BASIC17.2■□□□□ 0.34
LIN7CQ9NUP9 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC17.2■□□□□ 0.34
LIN7CQ9NUP9 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC17.2■□□□□ 0.34
LIN7CQ9NUP9 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LIN7CQ9NUP9 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LIN7CQ9NUP9 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LIN7CQ9NUP9 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
LIN7CQ9NUP9 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LIN7CQ9NUP9 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LIN7CQ9NUP9 NARF-205ENST00000412079 1760 ntTSL 5 BASIC17.2■□□□□ 0.34
LIN7CQ9NUP9 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LIN7CQ9NUP9 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
LIN7CQ9NUP9 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LIN7CQ9NUP9 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.2■□□□□ 0.34
LIN7CQ9NUP9 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LIN7CQ9NUP9 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LIN7CQ9NUP9 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
LIN7CQ9NUP9 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
LIN7CQ9NUP9 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LIN7CQ9NUP9 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
LIN7CQ9NUP9 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms