Protein–RNA interactions for Protein: Q9NUL5

RYDEN, Repressor of yield of DENV protein, humanhuman

Known RBP Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RYDENQ9NUL5 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RYDENQ9NUL5 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RYDENQ9NUL5 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RYDENQ9NUL5 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RYDENQ9NUL5 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
RYDENQ9NUL5 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RYDENQ9NUL5 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RYDENQ9NUL5 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RYDENQ9NUL5 MCRIP2P1-201ENST00000394346 511 ntBASIC19.02■□□□□ 0.64
RYDENQ9NUL5 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RYDENQ9NUL5 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RYDENQ9NUL5 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RYDENQ9NUL5 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.02■□□□□ 0.64
RYDENQ9NUL5 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RYDENQ9NUL5 MIR4758-201ENST00000577688 71 ntBASIC19.02■□□□□ 0.64
RYDENQ9NUL5 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC19.02■□□□□ 0.64
RYDENQ9NUL5 AP001002.2-201ENST00000625137 386 ntBASIC19.02■□□□□ 0.64
RYDENQ9NUL5 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.02■□□□□ 0.64
RYDENQ9NUL5 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
RYDENQ9NUL5 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
RYDENQ9NUL5 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
RYDENQ9NUL5 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RYDENQ9NUL5 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
RYDENQ9NUL5 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.01■□□□□ 0.63
RYDENQ9NUL5 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.01■□□□□ 0.63
RYDENQ9NUL5 AC105036.2-201ENST00000569468 176 ntBASIC19.01■□□□□ 0.63
RYDENQ9NUL5 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.01■□□□□ 0.63
RYDENQ9NUL5 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.01■□□□□ 0.63
RYDENQ9NUL5 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
RYDENQ9NUL5 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RYDENQ9NUL5 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RYDENQ9NUL5 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RYDENQ9NUL5 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.01■□□□□ 0.63
RYDENQ9NUL5 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RYDENQ9NUL5 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RYDENQ9NUL5 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
RYDENQ9NUL5 RGMA-211ENST00000557420 989 ntTSL 3 BASIC19■□□□□ 0.63
RYDENQ9NUL5 AC104771.1-201ENST00000603335 964 ntBASIC19■□□□□ 0.63
RYDENQ9NUL5 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19■□□□□ 0.63
RYDENQ9NUL5 AC092118.2-201ENST00000613495 667 ntBASIC19■□□□□ 0.63
RYDENQ9NUL5 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RYDENQ9NUL5 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
RYDENQ9NUL5 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
RYDENQ9NUL5 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RYDENQ9NUL5 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19■□□□□ 0.63
RYDENQ9NUL5 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19■□□□□ 0.63
RYDENQ9NUL5 MKRN4P-201ENST00000444706 1521 ntBASIC19■□□□□ 0.63
RYDENQ9NUL5 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19■□□□□ 0.63
RYDENQ9NUL5 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RYDENQ9NUL5 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.99■□□□□ 0.63
RYDENQ9NUL5 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RYDENQ9NUL5 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
RYDENQ9NUL5 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RYDENQ9NUL5 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RYDENQ9NUL5 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RYDENQ9NUL5 AC012497.1-201ENST00000429392 575 ntBASIC18.99■□□□□ 0.63
RYDENQ9NUL5 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RYDENQ9NUL5 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.99■□□□□ 0.63
RYDENQ9NUL5 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.99■□□□□ 0.63
RYDENQ9NUL5 AC133041.1-202ENST00000642053 222 ntBASIC18.99■□□□□ 0.63
RYDENQ9NUL5 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RYDENQ9NUL5 AC079834.2-201ENST00000609776 1949 ntBASIC18.99■□□□□ 0.63
RYDENQ9NUL5 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RYDENQ9NUL5 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RYDENQ9NUL5 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RYDENQ9NUL5 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RYDENQ9NUL5 AC010980.2-201ENST00000587099 1412 ntBASIC18.99■□□□□ 0.63
RYDENQ9NUL5 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RYDENQ9NUL5 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.98■□□□□ 0.63
RYDENQ9NUL5 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RYDENQ9NUL5 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
RYDENQ9NUL5 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RYDENQ9NUL5 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RYDENQ9NUL5 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RYDENQ9NUL5 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RYDENQ9NUL5 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
RYDENQ9NUL5 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RYDENQ9NUL5 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RYDENQ9NUL5 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.98■□□□□ 0.63
RYDENQ9NUL5 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
RYDENQ9NUL5 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.98■□□□□ 0.63
RYDENQ9NUL5 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.98■□□□□ 0.63
RYDENQ9NUL5 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.98■□□□□ 0.63
RYDENQ9NUL5 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
RYDENQ9NUL5 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.98■□□□□ 0.63
RYDENQ9NUL5 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.98■□□□□ 0.63
RYDENQ9NUL5 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RYDENQ9NUL5 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RYDENQ9NUL5 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RYDENQ9NUL5 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RYDENQ9NUL5 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RYDENQ9NUL5 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RYDENQ9NUL5 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RYDENQ9NUL5 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.98■□□□□ 0.63
RYDENQ9NUL5 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RYDENQ9NUL5 AC011484.1-201ENST00000377652 1995 ntBASIC18.97■□□□□ 0.63
RYDENQ9NUL5 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC18.97■□□□□ 0.63
RYDENQ9NUL5 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RYDENQ9NUL5 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RYDENQ9NUL5 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms