Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
UBQLN4Q9NRR5 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
UBQLN4Q9NRR5 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.12■□□□□ 0.65
UBQLN4Q9NRR5 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.12■□□□□ 0.65
UBQLN4Q9NRR5 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.12■□□□□ 0.65
UBQLN4Q9NRR5 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
UBQLN4Q9NRR5 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
UBQLN4Q9NRR5 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
UBQLN4Q9NRR5 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.12■□□□□ 0.65
UBQLN4Q9NRR5 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
UBQLN4Q9NRR5 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
UBQLN4Q9NRR5 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
UBQLN4Q9NRR5 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
UBQLN4Q9NRR5 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.11■□□□□ 0.65
UBQLN4Q9NRR5 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
UBQLN4Q9NRR5 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.11■□□□□ 0.65
UBQLN4Q9NRR5 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.11■□□□□ 0.65
UBQLN4Q9NRR5 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBQLN4Q9NRR5 KRT18P11-201ENST00000435214 1283 ntBASIC19.11■□□□□ 0.65
UBQLN4Q9NRR5 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.11■□□□□ 0.65
UBQLN4Q9NRR5 AC137761.2-201ENST00000561729 223 ntBASIC19.11■□□□□ 0.65
UBQLN4Q9NRR5 AC145350.3-201ENST00000569033 163 ntBASIC19.11■□□□□ 0.65
UBQLN4Q9NRR5 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.11■□□□□ 0.65
UBQLN4Q9NRR5 UBE2DNL-204ENST00000602536 740 ntBASIC19.11■□□□□ 0.65
UBQLN4Q9NRR5 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.11■□□□□ 0.65
UBQLN4Q9NRR5 RARRES2P11-201ENST00000635158 484 ntBASIC19.11■□□□□ 0.65
UBQLN4Q9NRR5 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
UBQLN4Q9NRR5 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBQLN4Q9NRR5 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBQLN4Q9NRR5 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBQLN4Q9NRR5 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBQLN4Q9NRR5 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
UBQLN4Q9NRR5 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBQLN4Q9NRR5 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBQLN4Q9NRR5 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBQLN4Q9NRR5 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.1■□□□□ 0.65
UBQLN4Q9NRR5 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBQLN4Q9NRR5 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBQLN4Q9NRR5 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.1■□□□□ 0.65
UBQLN4Q9NRR5 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBQLN4Q9NRR5 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBQLN4Q9NRR5 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBQLN4Q9NRR5 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.1■□□□□ 0.65
UBQLN4Q9NRR5 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBQLN4Q9NRR5 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.1■□□□□ 0.65
UBQLN4Q9NRR5 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
UBQLN4Q9NRR5 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
UBQLN4Q9NRR5 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBQLN4Q9NRR5 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBQLN4Q9NRR5 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBQLN4Q9NRR5 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.1■□□□□ 0.65
UBQLN4Q9NRR5 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBQLN4Q9NRR5 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
UBQLN4Q9NRR5 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
UBQLN4Q9NRR5 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.09■□□□□ 0.65
UBQLN4Q9NRR5 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
UBQLN4Q9NRR5 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.09■□□□□ 0.65
UBQLN4Q9NRR5 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
UBQLN4Q9NRR5 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.09■□□□□ 0.65
UBQLN4Q9NRR5 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.09■□□□□ 0.65
UBQLN4Q9NRR5 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.09■□□□□ 0.65
UBQLN4Q9NRR5 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.09■□□□□ 0.65
UBQLN4Q9NRR5 AC243732.1-201ENST00000612648 864 ntBASIC19.09■□□□□ 0.65
UBQLN4Q9NRR5 MYCNOS-205ENST00000641950 531 ntBASIC19.09■□□□□ 0.65
UBQLN4Q9NRR5 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
UBQLN4Q9NRR5 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.08■□□□□ 0.65
UBQLN4Q9NRR5 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
UBQLN4Q9NRR5 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
UBQLN4Q9NRR5 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.08■□□□□ 0.64
UBQLN4Q9NRR5 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
UBQLN4Q9NRR5 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.08■□□□□ 0.64
UBQLN4Q9NRR5 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.08■□□□□ 0.64
UBQLN4Q9NRR5 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
UBQLN4Q9NRR5 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.08■□□□□ 0.64
UBQLN4Q9NRR5 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
UBQLN4Q9NRR5 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.64
UBQLN4Q9NRR5 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
UBQLN4Q9NRR5 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
UBQLN4Q9NRR5 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
UBQLN4Q9NRR5 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
UBQLN4Q9NRR5 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
UBQLN4Q9NRR5 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
UBQLN4Q9NRR5 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
UBQLN4Q9NRR5 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.07■□□□□ 0.64
UBQLN4Q9NRR5 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
UBQLN4Q9NRR5 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
UBQLN4Q9NRR5 AC016769.1-201ENST00000409132 1010 ntBASIC19.07■□□□□ 0.64
UBQLN4Q9NRR5 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
UBQLN4Q9NRR5 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
UBQLN4Q9NRR5 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.07■□□□□ 0.64
UBQLN4Q9NRR5 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.07■□□□□ 0.64
UBQLN4Q9NRR5 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.07■□□□□ 0.64
UBQLN4Q9NRR5 AC121338.2-201ENST00000622535 1744 ntBASIC19.07■□□□□ 0.64
UBQLN4Q9NRR5 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
UBQLN4Q9NRR5 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
UBQLN4Q9NRR5 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.07■□□□□ 0.64
UBQLN4Q9NRR5 RBM17P2-201ENST00000616397 1405 ntBASIC19.07■□□□□ 0.64
UBQLN4Q9NRR5 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
UBQLN4Q9NRR5 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
UBQLN4Q9NRR5 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms