Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.82■□□□□ 0.6
HMG20AQ9NP66 CD72-202ENST00000378430 585 ntTSL 3 BASIC18.82■□□□□ 0.6
HMG20AQ9NP66 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC18.82■□□□□ 0.6
HMG20AQ9NP66 AC010997.5-201ENST00000609182 354 ntBASIC18.82■□□□□ 0.6
HMG20AQ9NP66 EXOG-217ENST00000630638 197 ntTSL 5 BASIC18.82■□□□□ 0.6
HMG20AQ9NP66 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC18.82■□□□□ 0.6
HMG20AQ9NP66 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HMG20AQ9NP66 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
HMG20AQ9NP66 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HMG20AQ9NP66 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
HMG20AQ9NP66 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
HMG20AQ9NP66 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HMG20AQ9NP66 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
HMG20AQ9NP66 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HMG20AQ9NP66 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HMG20AQ9NP66 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
HMG20AQ9NP66 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
HMG20AQ9NP66 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HMG20AQ9NP66 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.82■□□□□ 0.6
HMG20AQ9NP66 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.81■□□□□ 0.6
HMG20AQ9NP66 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
HMG20AQ9NP66 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
HMG20AQ9NP66 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HMG20AQ9NP66 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HMG20AQ9NP66 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
HMG20AQ9NP66 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HMG20AQ9NP66 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HMG20AQ9NP66 LINC01529-204ENST00000636474 1715 ntBASIC18.81■□□□□ 0.6
HMG20AQ9NP66 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.81■□□□□ 0.6
HMG20AQ9NP66 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HMG20AQ9NP66 CA15P2-201ENST00000611168 834 ntBASIC18.81■□□□□ 0.6
HMG20AQ9NP66 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
HMG20AQ9NP66 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
HMG20AQ9NP66 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
HMG20AQ9NP66 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
HMG20AQ9NP66 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HMG20AQ9NP66 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
HMG20AQ9NP66 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HMG20AQ9NP66 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HMG20AQ9NP66 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
HMG20AQ9NP66 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HMG20AQ9NP66 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
HMG20AQ9NP66 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
HMG20AQ9NP66 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.8■□□□□ 0.6
HMG20AQ9NP66 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.8■□□□□ 0.6
HMG20AQ9NP66 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HMG20AQ9NP66 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
HMG20AQ9NP66 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HMG20AQ9NP66 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HMG20AQ9NP66 TSPY9P-201ENST00000440215 945 ntBASIC18.8■□□□□ 0.6
HMG20AQ9NP66 TSPY11P-201ENST00000442607 1045 ntBASIC18.8■□□□□ 0.6
HMG20AQ9NP66 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC18.8■□□□□ 0.6
HMG20AQ9NP66 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.8■□□□□ 0.6
HMG20AQ9NP66 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HMG20AQ9NP66 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HMG20AQ9NP66 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HMG20AQ9NP66 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC18.8■□□□□ 0.6
HMG20AQ9NP66 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
HMG20AQ9NP66 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HMG20AQ9NP66 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HMG20AQ9NP66 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
HMG20AQ9NP66 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
HMG20AQ9NP66 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.79■□□□□ 0.6
HMG20AQ9NP66 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
HMG20AQ9NP66 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HMG20AQ9NP66 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HMG20AQ9NP66 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC18.79■□□□□ 0.6
HMG20AQ9NP66 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HMG20AQ9NP66 TFPT-201ENST00000391757 774 ntTSL 5 BASIC18.79■□□□□ 0.6
HMG20AQ9NP66 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
HMG20AQ9NP66 HES6-204ENST00000409182 863 ntTSL 2 BASIC18.79■□□□□ 0.6
HMG20AQ9NP66 ASB1-202ENST00000409297 878 ntTSL 5 BASIC18.79■□□□□ 0.6
HMG20AQ9NP66 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HMG20AQ9NP66 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
HMG20AQ9NP66 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HMG20AQ9NP66 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HMG20AQ9NP66 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HMG20AQ9NP66 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
HMG20AQ9NP66 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HMG20AQ9NP66 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
HMG20AQ9NP66 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.78■□□□□ 0.6
HMG20AQ9NP66 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
HMG20AQ9NP66 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HMG20AQ9NP66 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
HMG20AQ9NP66 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HMG20AQ9NP66 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HMG20AQ9NP66 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
HMG20AQ9NP66 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.78■□□□□ 0.6
HMG20AQ9NP66 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HMG20AQ9NP66 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
HMG20AQ9NP66 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HMG20AQ9NP66 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.6
HMG20AQ9NP66 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
HMG20AQ9NP66 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
HMG20AQ9NP66 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HMG20AQ9NP66 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HMG20AQ9NP66 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HMG20AQ9NP66 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HMG20AQ9NP66 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
HMG20AQ9NP66 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms