Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 AP001160.3-201ENST00000601484 763 ntBASIC21.72■■□□□ 1.07
CD248Q9HCU0 WT1-AS_3.1-201ENST00000613262 234 ntBASIC21.72■■□□□ 1.07
CD248Q9HCU0 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.72■■□□□ 1.07
CD248Q9HCU0 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CD248Q9HCU0 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC21.72■■□□□ 1.07
CD248Q9HCU0 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CD248Q9HCU0 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CD248Q9HCU0 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
CD248Q9HCU0 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CD248Q9HCU0 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CD248Q9HCU0 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
CD248Q9HCU0 GPX1P1-201ENST00000388829 606 ntBASIC21.71■■□□□ 1.07
CD248Q9HCU0 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CD248Q9HCU0 AL355802.2-201ENST00000402069 882 ntBASIC21.71■■□□□ 1.07
CD248Q9HCU0 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
CD248Q9HCU0 GUSBP6-202ENST00000438529 1198 ntBASIC21.71■■□□□ 1.07
CD248Q9HCU0 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC21.71■■□□□ 1.07
CD248Q9HCU0 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC21.71■■□□□ 1.07
CD248Q9HCU0 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CD248Q9HCU0 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CD248Q9HCU0 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
CD248Q9HCU0 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
CD248Q9HCU0 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
CD248Q9HCU0 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CD248Q9HCU0 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CD248Q9HCU0 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CD248Q9HCU0 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CD248Q9HCU0 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
CD248Q9HCU0 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CD248Q9HCU0 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC21.7■■□□□ 1.06
CD248Q9HCU0 PARP1-202ENST00000366792 553 ntTSL 3 BASIC21.7■■□□□ 1.06
CD248Q9HCU0 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC21.7■■□□□ 1.06
CD248Q9HCU0 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
CD248Q9HCU0 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC21.7■■□□□ 1.06
CD248Q9HCU0 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.7■■□□□ 1.06
CD248Q9HCU0 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC21.7■■□□□ 1.06
CD248Q9HCU0 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC21.7■■□□□ 1.06
CD248Q9HCU0 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC21.7■■□□□ 1.06
CD248Q9HCU0 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CD248Q9HCU0 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC21.7■■□□□ 1.06
CD248Q9HCU0 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CD248Q9HCU0 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.7■■□□□ 1.06
CD248Q9HCU0 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC21.7■■□□□ 1.06
CD248Q9HCU0 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC21.7■■□□□ 1.06
CD248Q9HCU0 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CD248Q9HCU0 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC21.7■■□□□ 1.06
CD248Q9HCU0 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
CD248Q9HCU0 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CD248Q9HCU0 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CD248Q9HCU0 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.69■■□□□ 1.06
CD248Q9HCU0 SERP1-208ENST00000491660 830 ntTSL 2 BASIC21.69■■□□□ 1.06
CD248Q9HCU0 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC21.69■■□□□ 1.06
CD248Q9HCU0 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC21.69■■□□□ 1.06
CD248Q9HCU0 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC21.69■■□□□ 1.06
CD248Q9HCU0 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC21.69■■□□□ 1.06
CD248Q9HCU0 AC231657.2-201ENST00000624556 255 ntBASIC21.69■■□□□ 1.06
CD248Q9HCU0 MYCNOS-205ENST00000641950 531 ntBASIC21.69■■□□□ 1.06
CD248Q9HCU0 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC21.69■■□□□ 1.06
CD248Q9HCU0 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CD248Q9HCU0 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC21.69■■□□□ 1.06
CD248Q9HCU0 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.69■■□□□ 1.06
CD248Q9HCU0 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CD248Q9HCU0 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CD248Q9HCU0 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CD248Q9HCU0 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CD248Q9HCU0 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.68■■□□□ 1.06
CD248Q9HCU0 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CD248Q9HCU0 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
CD248Q9HCU0 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC21.68■■□□□ 1.06
CD248Q9HCU0 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC21.68■■□□□ 1.06
CD248Q9HCU0 SLC7A5P2-201ENST00000553010 536 ntBASIC21.68■■□□□ 1.06
CD248Q9HCU0 PARP1-210ENST00000629232 477 ntTSL 5 BASIC21.68■■□□□ 1.06
CD248Q9HCU0 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CD248Q9HCU0 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
CD248Q9HCU0 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CD248Q9HCU0 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CD248Q9HCU0 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.68■■□□□ 1.06
CD248Q9HCU0 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CD248Q9HCU0 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC21.67■■□□□ 1.06
CD248Q9HCU0 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CD248Q9HCU0 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
CD248Q9HCU0 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC21.67■■□□□ 1.06
CD248Q9HCU0 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CD248Q9HCU0 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.67■■□□□ 1.06
CD248Q9HCU0 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CD248Q9HCU0 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC21.67■■□□□ 1.06
CD248Q9HCU0 TSPY6P-201ENST00000448518 926 ntBASIC21.67■■□□□ 1.06
CD248Q9HCU0 AC138907.5-202ENST00000569484 235 ntBASIC21.67■■□□□ 1.06
CD248Q9HCU0 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC21.67■■□□□ 1.06
CD248Q9HCU0 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC21.67■■□□□ 1.06
CD248Q9HCU0 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CD248Q9HCU0 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC21.67■■□□□ 1.06
CD248Q9HCU0 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
CD248Q9HCU0 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC21.67■■□□□ 1.06
CD248Q9HCU0 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CD248Q9HCU0 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.66■■□□□ 1.06
CD248Q9HCU0 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC21.66■■□□□ 1.06
CD248Q9HCU0 ABHD17AP1-201ENST00000358206 933 ntBASIC21.66■■□□□ 1.06
CD248Q9HCU0 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CD248Q9HCU0 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms