Protein–RNA interactions for Protein: Q9HCG8

CWC22, Pre-mRNA-splicing factor CWC22 homolog, humanhuman

Known RBP Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CWC22Q9HCG8 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC25.11■■□□□ 1.61
CWC22Q9HCG8 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
CWC22Q9HCG8 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC25.11■■□□□ 1.61
CWC22Q9HCG8 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
CWC22Q9HCG8 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC25.11■■□□□ 1.61
CWC22Q9HCG8 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC25.11■■□□□ 1.61
CWC22Q9HCG8 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC25.11■■□□□ 1.61
CWC22Q9HCG8 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CWC22Q9HCG8 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC25.11■■□□□ 1.61
CWC22Q9HCG8 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CWC22Q9HCG8 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC25.11■■□□□ 1.61
CWC22Q9HCG8 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CWC22Q9HCG8 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC25.1■■□□□ 1.61
CWC22Q9HCG8 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC25.1■■□□□ 1.61
CWC22Q9HCG8 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
CWC22Q9HCG8 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CWC22Q9HCG8 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
CWC22Q9HCG8 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC25.1■■□□□ 1.61
CWC22Q9HCG8 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
CWC22Q9HCG8 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
CWC22Q9HCG8 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC25.09■■□□□ 1.61
CWC22Q9HCG8 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CWC22Q9HCG8 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CWC22Q9HCG8 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
CWC22Q9HCG8 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CWC22Q9HCG8 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC25.09■■□□□ 1.61
CWC22Q9HCG8 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
CWC22Q9HCG8 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC25.09■■□□□ 1.61
CWC22Q9HCG8 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CWC22Q9HCG8 EMC9-206ENST00000560403 872 ntTSL 2 BASIC25.09■■□□□ 1.61
CWC22Q9HCG8 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC25.09■■□□□ 1.61
CWC22Q9HCG8 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CWC22Q9HCG8 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CWC22Q9HCG8 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CWC22Q9HCG8 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
CWC22Q9HCG8 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
CWC22Q9HCG8 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.61
CWC22Q9HCG8 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC25.08■■□□□ 1.61
CWC22Q9HCG8 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
CWC22Q9HCG8 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC25.08■■□□□ 1.61
CWC22Q9HCG8 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC25.08■■□□□ 1.61
CWC22Q9HCG8 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
CWC22Q9HCG8 MIR663A-201ENST00000385250 93 ntBASIC25.08■■□□□ 1.61
CWC22Q9HCG8 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
CWC22Q9HCG8 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC25.08■■□□□ 1.6
CWC22Q9HCG8 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
CWC22Q9HCG8 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC25.07■■□□□ 1.6
CWC22Q9HCG8 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC25.07■■□□□ 1.6
CWC22Q9HCG8 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC25.07■■□□□ 1.6
CWC22Q9HCG8 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
CWC22Q9HCG8 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
CWC22Q9HCG8 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC25.07■■□□□ 1.6
CWC22Q9HCG8 CROCCP5-201ENST00000436658 830 ntBASIC25.07■■□□□ 1.6
CWC22Q9HCG8 MAP2K4P1-201ENST00000438453 1195 ntBASIC25.07■■□□□ 1.6
CWC22Q9HCG8 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
CWC22Q9HCG8 MDK-213ENST00000617138 635 ntTSL 2 BASIC25.07■■□□□ 1.6
CWC22Q9HCG8 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
CWC22Q9HCG8 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
CWC22Q9HCG8 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
CWC22Q9HCG8 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC25.07■■□□□ 1.6
CWC22Q9HCG8 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
CWC22Q9HCG8 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC25.06■■□□□ 1.6
CWC22Q9HCG8 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC25.06■■□□□ 1.6
CWC22Q9HCG8 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC25.06■■□□□ 1.6
CWC22Q9HCG8 AL049796.1-201ENST00000565336 1766 ntBASIC25.06■■□□□ 1.6
CWC22Q9HCG8 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CWC22Q9HCG8 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CWC22Q9HCG8 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CWC22Q9HCG8 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC25.06■■□□□ 1.6
CWC22Q9HCG8 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
CWC22Q9HCG8 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC25.06■■□□□ 1.6
CWC22Q9HCG8 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC25.06■■□□□ 1.6
CWC22Q9HCG8 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC25.06■■□□□ 1.6
CWC22Q9HCG8 WT1-AS_3.1-201ENST00000613262 234 ntBASIC25.06■■□□□ 1.6
CWC22Q9HCG8 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CWC22Q9HCG8 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CWC22Q9HCG8 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC25.05■■□□□ 1.6
CWC22Q9HCG8 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC25.05■■□□□ 1.6
CWC22Q9HCG8 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
CWC22Q9HCG8 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
CWC22Q9HCG8 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CWC22Q9HCG8 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC25.05■■□□□ 1.6
CWC22Q9HCG8 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
CWC22Q9HCG8 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC25.05■■□□□ 1.6
CWC22Q9HCG8 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC25.05■■□□□ 1.6
CWC22Q9HCG8 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
CWC22Q9HCG8 PARN-205ENST00000539279 1557 ntTSL 2 BASIC25.05■■□□□ 1.6
CWC22Q9HCG8 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CWC22Q9HCG8 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CWC22Q9HCG8 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CWC22Q9HCG8 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC25.04■■□□□ 1.6
CWC22Q9HCG8 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
CWC22Q9HCG8 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC25.04■■□□□ 1.6
CWC22Q9HCG8 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CWC22Q9HCG8 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC25.04■■□□□ 1.6
CWC22Q9HCG8 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC25.04■■□□□ 1.6
CWC22Q9HCG8 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC25.04■■□□□ 1.6
CWC22Q9HCG8 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
CWC22Q9HCG8 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
CWC22Q9HCG8 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms