Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC25.43■■□□□ 1.66
UPF2Q9HAU5 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
UPF2Q9HAU5 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
UPF2Q9HAU5 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC25.42■■□□□ 1.66
UPF2Q9HAU5 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
UPF2Q9HAU5 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC25.42■■□□□ 1.66
UPF2Q9HAU5 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC25.42■■□□□ 1.66
UPF2Q9HAU5 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
UPF2Q9HAU5 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
UPF2Q9HAU5 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
UPF2Q9HAU5 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC25.42■■□□□ 1.66
UPF2Q9HAU5 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
UPF2Q9HAU5 RASSF1-AS1-201ENST00000629828 790 ntBASIC25.42■■□□□ 1.66
UPF2Q9HAU5 SYT6-210ENST00000641643 1587 ntBASIC25.42■■□□□ 1.66
UPF2Q9HAU5 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC25.42■■□□□ 1.66
UPF2Q9HAU5 AC007225.1-201ENST00000566331 1836 ntBASIC25.42■■□□□ 1.66
UPF2Q9HAU5 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
UPF2Q9HAU5 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC25.41■■□□□ 1.66
UPF2Q9HAU5 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
UPF2Q9HAU5 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC25.41■■□□□ 1.66
UPF2Q9HAU5 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
UPF2Q9HAU5 OR2A1-AS1-204ENST00000470435 602 ntBASIC25.41■■□□□ 1.66
UPF2Q9HAU5 DUX4L19-201ENST00000557448 1267 ntBASIC25.41■■□□□ 1.66
UPF2Q9HAU5 AC007952.6-201ENST00000573168 2673 ntBASIC25.41■■□□□ 1.66
UPF2Q9HAU5 AC003957.1-201ENST00000625108 2673 ntBASIC25.41■■□□□ 1.66
UPF2Q9HAU5 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
UPF2Q9HAU5 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC25.41■■□□□ 1.66
UPF2Q9HAU5 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC25.41■■□□□ 1.66
UPF2Q9HAU5 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC25.41■■□□□ 1.66
UPF2Q9HAU5 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC25.41■■□□□ 1.66
UPF2Q9HAU5 AC020907.5-201ENST00000624372 1936 ntBASIC25.41■■□□□ 1.66
UPF2Q9HAU5 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC25.41■■□□□ 1.66
UPF2Q9HAU5 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
UPF2Q9HAU5 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC25.4■■□□□ 1.66
UPF2Q9HAU5 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
UPF2Q9HAU5 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC25.4■■□□□ 1.66
UPF2Q9HAU5 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
UPF2Q9HAU5 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC25.4■■□□□ 1.66
UPF2Q9HAU5 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
UPF2Q9HAU5 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC25.4■■□□□ 1.66
UPF2Q9HAU5 AC136469.2-201ENST00000623944 1028 ntBASIC25.4■■□□□ 1.66
UPF2Q9HAU5 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC25.4■■□□□ 1.66
UPF2Q9HAU5 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
UPF2Q9HAU5 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC25.4■■□□□ 1.66
UPF2Q9HAU5 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC25.4■■□□□ 1.66
UPF2Q9HAU5 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
UPF2Q9HAU5 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
UPF2Q9HAU5 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC25.39■■□□□ 1.66
UPF2Q9HAU5 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
UPF2Q9HAU5 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC25.39■■□□□ 1.66
UPF2Q9HAU5 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.66
UPF2Q9HAU5 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
UPF2Q9HAU5 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC25.39■■□□□ 1.66
UPF2Q9HAU5 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
UPF2Q9HAU5 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
UPF2Q9HAU5 SLC47A1P1-202ENST00000449666 945 ntBASIC25.39■■□□□ 1.66
UPF2Q9HAU5 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC25.39■■□□□ 1.66
UPF2Q9HAU5 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC25.39■■□□□ 1.66
UPF2Q9HAU5 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
UPF2Q9HAU5 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC25.39■■□□□ 1.66
UPF2Q9HAU5 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC25.39■■□□□ 1.65
UPF2Q9HAU5 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC25.39■■□□□ 1.65
UPF2Q9HAU5 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.65
UPF2Q9HAU5 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC25.38■■□□□ 1.65
UPF2Q9HAU5 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC25.38■■□□□ 1.65
UPF2Q9HAU5 SERBP1P1-201ENST00000396021 1160 ntBASIC25.38■■□□□ 1.65
UPF2Q9HAU5 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
UPF2Q9HAU5 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC25.38■■□□□ 1.65
UPF2Q9HAU5 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC25.38■■□□□ 1.65
UPF2Q9HAU5 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC25.38■■□□□ 1.65
UPF2Q9HAU5 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC25.38■■□□□ 1.65
UPF2Q9HAU5 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
UPF2Q9HAU5 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC25.37■■□□□ 1.65
UPF2Q9HAU5 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
UPF2Q9HAU5 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC25.37■■□□□ 1.65
UPF2Q9HAU5 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
UPF2Q9HAU5 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
UPF2Q9HAU5 ME2-218ENST00000640965 2476 ntTSL 5 BASIC25.37■■□□□ 1.65
UPF2Q9HAU5 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC25.37■■□□□ 1.65
UPF2Q9HAU5 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
UPF2Q9HAU5 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC25.37■■□□□ 1.65
UPF2Q9HAU5 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
UPF2Q9HAU5 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC25.37■■□□□ 1.65
UPF2Q9HAU5 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC25.37■■□□□ 1.65
UPF2Q9HAU5 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC25.37■■□□□ 1.65
UPF2Q9HAU5 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC25.36■■□□□ 1.65
UPF2Q9HAU5 RARG-204ENST00000543726 1779 ntTSL 2 BASIC25.36■■□□□ 1.65
UPF2Q9HAU5 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC25.36■■□□□ 1.65
UPF2Q9HAU5 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
UPF2Q9HAU5 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC25.36■■□□□ 1.65
UPF2Q9HAU5 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC25.36■■□□□ 1.65
UPF2Q9HAU5 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
UPF2Q9HAU5 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC25.36■■□□□ 1.65
UPF2Q9HAU5 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
UPF2Q9HAU5 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
UPF2Q9HAU5 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC25.36■■□□□ 1.65
UPF2Q9HAU5 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
UPF2Q9HAU5 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC25.36■■□□□ 1.65
UPF2Q9HAU5 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC25.36■■□□□ 1.65
UPF2Q9HAU5 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC25.36■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms