Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.96
PHACTR1Q9C0D0 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PHACTR1Q9C0D0 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PHACTR1Q9C0D0 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PHACTR1Q9C0D0 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PHACTR1Q9C0D0 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC21.07■□□□□ 0.96
PHACTR1Q9C0D0 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC21.07■□□□□ 0.96
PHACTR1Q9C0D0 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
PHACTR1Q9C0D0 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PHACTR1Q9C0D0 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC21.07■□□□□ 0.96
PHACTR1Q9C0D0 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC21.07■□□□□ 0.96
PHACTR1Q9C0D0 AC053503.5-201ENST00000601508 636 ntBASIC21.07■□□□□ 0.96
PHACTR1Q9C0D0 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC21.07■□□□□ 0.96
PHACTR1Q9C0D0 AC105233.4-201ENST00000642045 216 ntBASIC21.07■□□□□ 0.96
PHACTR1Q9C0D0 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
PHACTR1Q9C0D0 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
PHACTR1Q9C0D0 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PHACTR1Q9C0D0 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC21.07■□□□□ 0.96
PHACTR1Q9C0D0 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
PHACTR1Q9C0D0 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PHACTR1Q9C0D0 DET1-207ENST00000564406 2315 ntTSL 2 BASIC21.06■□□□□ 0.96
PHACTR1Q9C0D0 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC21.06■□□□□ 0.96
PHACTR1Q9C0D0 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
PHACTR1Q9C0D0 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PHACTR1Q9C0D0 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PHACTR1Q9C0D0 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PHACTR1Q9C0D0 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PHACTR1Q9C0D0 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PHACTR1Q9C0D0 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC21.06■□□□□ 0.96
PHACTR1Q9C0D0 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21.06■□□□□ 0.96
PHACTR1Q9C0D0 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.06■□□□□ 0.96
PHACTR1Q9C0D0 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PHACTR1Q9C0D0 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PHACTR1Q9C0D0 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC21.05■□□□□ 0.96
PHACTR1Q9C0D0 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC21.05■□□□□ 0.96
PHACTR1Q9C0D0 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
PHACTR1Q9C0D0 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC21.05■□□□□ 0.96
PHACTR1Q9C0D0 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PHACTR1Q9C0D0 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PHACTR1Q9C0D0 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
PHACTR1Q9C0D0 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PHACTR1Q9C0D0 UNC93B3-201ENST00000308076 687 ntBASIC21.05■□□□□ 0.96
PHACTR1Q9C0D0 AL136116.3-201ENST00000402907 1138 ntBASIC21.05■□□□□ 0.96
PHACTR1Q9C0D0 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
PHACTR1Q9C0D0 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC21.05■□□□□ 0.96
PHACTR1Q9C0D0 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PHACTR1Q9C0D0 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
PHACTR1Q9C0D0 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC21.05■□□□□ 0.96
PHACTR1Q9C0D0 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PHACTR1Q9C0D0 AL391422.3-201ENST00000603791 2761 ntBASIC21.05■□□□□ 0.96
PHACTR1Q9C0D0 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC21.05■□□□□ 0.96
PHACTR1Q9C0D0 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PHACTR1Q9C0D0 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PHACTR1Q9C0D0 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
PHACTR1Q9C0D0 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PHACTR1Q9C0D0 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
PHACTR1Q9C0D0 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PHACTR1Q9C0D0 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PHACTR1Q9C0D0 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
PHACTR1Q9C0D0 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PHACTR1Q9C0D0 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
PHACTR1Q9C0D0 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PHACTR1Q9C0D0 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PHACTR1Q9C0D0 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PHACTR1Q9C0D0 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC21.04■□□□□ 0.96
PHACTR1Q9C0D0 AC024257.2-201ENST00000549699 147 ntBASIC21.04■□□□□ 0.96
PHACTR1Q9C0D0 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC21.04■□□□□ 0.96
PHACTR1Q9C0D0 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC21.04■□□□□ 0.96
PHACTR1Q9C0D0 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PHACTR1Q9C0D0 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
PHACTR1Q9C0D0 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PHACTR1Q9C0D0 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
PHACTR1Q9C0D0 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC21.04■□□□□ 0.96
PHACTR1Q9C0D0 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC21.04■□□□□ 0.96
PHACTR1Q9C0D0 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PHACTR1Q9C0D0 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PHACTR1Q9C0D0 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC21.03■□□□□ 0.96
PHACTR1Q9C0D0 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC21.03■□□□□ 0.96
PHACTR1Q9C0D0 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PHACTR1Q9C0D0 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PHACTR1Q9C0D0 AP004607.4-201ENST00000530158 1459 ntBASIC21.03■□□□□ 0.96
PHACTR1Q9C0D0 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC21.03■□□□□ 0.96
PHACTR1Q9C0D0 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PHACTR1Q9C0D0 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC21.03■□□□□ 0.96
PHACTR1Q9C0D0 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC21.03■□□□□ 0.96
PHACTR1Q9C0D0 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
PHACTR1Q9C0D0 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC21.03■□□□□ 0.96
PHACTR1Q9C0D0 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
PHACTR1Q9C0D0 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PHACTR1Q9C0D0 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
PHACTR1Q9C0D0 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PHACTR1Q9C0D0 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC21.02■□□□□ 0.96
PHACTR1Q9C0D0 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PHACTR1Q9C0D0 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PHACTR1Q9C0D0 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC21.02■□□□□ 0.96
PHACTR1Q9C0D0 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PHACTR1Q9C0D0 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC21.02■□□□□ 0.96
PHACTR1Q9C0D0 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC21.02■□□□□ 0.96
PHACTR1Q9C0D0 AL136162.1-201ENST00000607711 1078 ntBASIC21.02■□□□□ 0.96
PHACTR1Q9C0D0 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms