Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC17.53■□□□□ 0.4
HDHD3Q9BSH5 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HDHD3Q9BSH5 AC009237.3-201ENST00000393279 1427 ntBASIC17.53■□□□□ 0.4
HDHD3Q9BSH5 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HDHD3Q9BSH5 RARG-204ENST00000543726 1779 ntTSL 2 BASIC17.53■□□□□ 0.4
HDHD3Q9BSH5 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HDHD3Q9BSH5 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC17.52■□□□□ 0.4
HDHD3Q9BSH5 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC17.52■□□□□ 0.4
HDHD3Q9BSH5 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
HDHD3Q9BSH5 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HDHD3Q9BSH5 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
HDHD3Q9BSH5 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC17.52■□□□□ 0.4
HDHD3Q9BSH5 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
HDHD3Q9BSH5 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HDHD3Q9BSH5 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
HDHD3Q9BSH5 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
HDHD3Q9BSH5 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
HDHD3Q9BSH5 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
HDHD3Q9BSH5 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
HDHD3Q9BSH5 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
HDHD3Q9BSH5 AC008764.7-201ENST00000593779 1081 ntBASIC17.52■□□□□ 0.4
HDHD3Q9BSH5 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HDHD3Q9BSH5 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HDHD3Q9BSH5 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HDHD3Q9BSH5 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
HDHD3Q9BSH5 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HDHD3Q9BSH5 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
HDHD3Q9BSH5 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HDHD3Q9BSH5 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
HDHD3Q9BSH5 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HDHD3Q9BSH5 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC17.51■□□□□ 0.39
HDHD3Q9BSH5 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HDHD3Q9BSH5 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
HDHD3Q9BSH5 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC17.51■□□□□ 0.39
HDHD3Q9BSH5 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HDHD3Q9BSH5 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC17.51■□□□□ 0.39
HDHD3Q9BSH5 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC17.51■□□□□ 0.39
HDHD3Q9BSH5 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
HDHD3Q9BSH5 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
HDHD3Q9BSH5 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
HDHD3Q9BSH5 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
HDHD3Q9BSH5 AC007225.1-201ENST00000566331 1836 ntBASIC17.51■□□□□ 0.39
HDHD3Q9BSH5 AC005224.4-201ENST00000583262 1652 ntBASIC17.51■□□□□ 0.39
HDHD3Q9BSH5 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HDHD3Q9BSH5 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HDHD3Q9BSH5 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
HDHD3Q9BSH5 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC17.51■□□□□ 0.39
HDHD3Q9BSH5 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC17.51■□□□□ 0.39
HDHD3Q9BSH5 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HDHD3Q9BSH5 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
HDHD3Q9BSH5 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
HDHD3Q9BSH5 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
HDHD3Q9BSH5 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HDHD3Q9BSH5 AC135279.3-201ENST00000610945 1311 ntBASIC17.5■□□□□ 0.39
HDHD3Q9BSH5 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
HDHD3Q9BSH5 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HDHD3Q9BSH5 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
HDHD3Q9BSH5 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
HDHD3Q9BSH5 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HDHD3Q9BSH5 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HDHD3Q9BSH5 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HDHD3Q9BSH5 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC17.5■□□□□ 0.39
HDHD3Q9BSH5 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC17.5■□□□□ 0.39
HDHD3Q9BSH5 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC17.5■□□□□ 0.39
HDHD3Q9BSH5 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC17.5■□□□□ 0.39
HDHD3Q9BSH5 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HDHD3Q9BSH5 AC105233.4-201ENST00000642045 216 ntBASIC17.5■□□□□ 0.39
HDHD3Q9BSH5 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
HDHD3Q9BSH5 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC17.5■□□□□ 0.39
HDHD3Q9BSH5 AFG3L1P-217ENST00000557444 2447 ntBASIC17.5■□□□□ 0.39
HDHD3Q9BSH5 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HDHD3Q9BSH5 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
HDHD3Q9BSH5 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
HDHD3Q9BSH5 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HDHD3Q9BSH5 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC17.5■□□□□ 0.39
HDHD3Q9BSH5 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC17.5■□□□□ 0.39
HDHD3Q9BSH5 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
HDHD3Q9BSH5 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
HDHD3Q9BSH5 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC17.5■□□□□ 0.39
HDHD3Q9BSH5 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HDHD3Q9BSH5 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
HDHD3Q9BSH5 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC17.49■□□□□ 0.39
HDHD3Q9BSH5 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HDHD3Q9BSH5 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HDHD3Q9BSH5 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
HDHD3Q9BSH5 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC17.49■□□□□ 0.39
HDHD3Q9BSH5 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
HDHD3Q9BSH5 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC17.49■□□□□ 0.39
HDHD3Q9BSH5 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HDHD3Q9BSH5 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC17.49■□□□□ 0.39
HDHD3Q9BSH5 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
HDHD3Q9BSH5 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HDHD3Q9BSH5 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
HDHD3Q9BSH5 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
HDHD3Q9BSH5 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
HDHD3Q9BSH5 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HDHD3Q9BSH5 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC17.49■□□□□ 0.39
HDHD3Q9BSH5 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.49■□□□□ 0.39
HDHD3Q9BSH5 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HDHD3Q9BSH5 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms