Protein–RNA interactions for Protein: Q99795

GPA33, Cell surface A33 antigen, humanhuman

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPA33Q99795 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
GPA33Q99795 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
GPA33Q99795 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
GPA33Q99795 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
GPA33Q99795 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
GPA33Q99795 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
GPA33Q99795 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.89■□□□□ 0.61
GPA33Q99795 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
GPA33Q99795 AFG3L1P-217ENST00000557444 2447 ntBASIC18.89■□□□□ 0.61
GPA33Q99795 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
GPA33Q99795 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.89■□□□□ 0.61
GPA33Q99795 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
GPA33Q99795 FXN-202ENST00000396364 980 ntTSL 5 BASIC18.89■□□□□ 0.61
GPA33Q99795 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC18.89■□□□□ 0.61
GPA33Q99795 AC096631.2-201ENST00000436136 790 ntBASIC18.89■□□□□ 0.61
GPA33Q99795 AP001330.3-201ENST00000520123 633 ntBASIC18.89■□□□□ 0.61
GPA33Q99795 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC18.89■□□□□ 0.61
GPA33Q99795 GRAMD4P4-201ENST00000613563 1115 ntBASIC18.89■□□□□ 0.61
GPA33Q99795 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
GPA33Q99795 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
GPA33Q99795 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.89■□□□□ 0.61
GPA33Q99795 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC18.89■□□□□ 0.61
GPA33Q99795 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
GPA33Q99795 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.89■□□□□ 0.61
GPA33Q99795 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.89■□□□□ 0.61
GPA33Q99795 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.89■□□□□ 0.61
GPA33Q99795 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
GPA33Q99795 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.89■□□□□ 0.61
GPA33Q99795 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
GPA33Q99795 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
GPA33Q99795 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.88■□□□□ 0.61
GPA33Q99795 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
GPA33Q99795 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
GPA33Q99795 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
GPA33Q99795 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
GPA33Q99795 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
GPA33Q99795 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC18.88■□□□□ 0.61
GPA33Q99795 PBX2P1-201ENST00000493219 1291 ntBASIC18.88■□□□□ 0.61
GPA33Q99795 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC18.88■□□□□ 0.61
GPA33Q99795 AC027682.1-201ENST00000562846 899 ntBASIC18.88■□□□□ 0.61
GPA33Q99795 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
GPA33Q99795 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.88■□□□□ 0.61
GPA33Q99795 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
GPA33Q99795 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
GPA33Q99795 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
GPA33Q99795 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
GPA33Q99795 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
GPA33Q99795 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.88■□□□□ 0.61
GPA33Q99795 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
GPA33Q99795 FP700111.2-201ENST00000619190 1892 ntBASIC18.88■□□□□ 0.61
GPA33Q99795 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
GPA33Q99795 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
GPA33Q99795 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
GPA33Q99795 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
GPA33Q99795 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
GPA33Q99795 MFF-208ENST00000409616 1247 ntTSL 5 BASIC18.87■□□□□ 0.61
GPA33Q99795 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.87■□□□□ 0.61
GPA33Q99795 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
GPA33Q99795 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
GPA33Q99795 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.87■□□□□ 0.61
GPA33Q99795 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.87■□□□□ 0.61
GPA33Q99795 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC18.87■□□□□ 0.61
GPA33Q99795 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
GPA33Q99795 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC18.87■□□□□ 0.61
GPA33Q99795 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.87■□□□□ 0.61
GPA33Q99795 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
GPA33Q99795 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.86■□□□□ 0.61
GPA33Q99795 AC112907.3-201ENST00000577781 2400 ntBASIC18.86■□□□□ 0.61
GPA33Q99795 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GPA33Q99795 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
GPA33Q99795 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.86■□□□□ 0.61
GPA33Q99795 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
GPA33Q99795 AL512408.1-201ENST00000569378 2000 ntBASIC18.86■□□□□ 0.61
GPA33Q99795 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.86■□□□□ 0.61
GPA33Q99795 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
GPA33Q99795 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
GPA33Q99795 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
GPA33Q99795 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GPA33Q99795 AC061975.6-201ENST00000579045 1553 ntBASIC18.86■□□□□ 0.61
GPA33Q99795 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.86■□□□□ 0.61
GPA33Q99795 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GPA33Q99795 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC18.86■□□□□ 0.61
GPA33Q99795 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
GPA33Q99795 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GPA33Q99795 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GPA33Q99795 MIR572-201ENST00000384983 95 ntBASIC18.86■□□□□ 0.61
GPA33Q99795 EEF1DP3-203ENST00000566025 782 ntBASIC18.86■□□□□ 0.61
GPA33Q99795 AC106739.1-201ENST00000617035 715 ntBASIC18.86■□□□□ 0.61
GPA33Q99795 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC18.86■□□□□ 0.61
GPA33Q99795 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
GPA33Q99795 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.86■□□□□ 0.61
GPA33Q99795 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.86■□□□□ 0.61
GPA33Q99795 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
GPA33Q99795 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC18.86■□□□□ 0.61
GPA33Q99795 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GPA33Q99795 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
GPA33Q99795 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
GPA33Q99795 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
GPA33Q99795 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
GPA33Q99795 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms