Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.85■□□□□ 0.61
SNX18Q96RF0 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SNX18Q96RF0 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
SNX18Q96RF0 LHPP-203ENST00000392757 840 ntTSL 3 BASIC18.85■□□□□ 0.61
SNX18Q96RF0 AC099791.1-201ENST00000416440 715 ntBASIC18.85■□□□□ 0.61
SNX18Q96RF0 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SNX18Q96RF0 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC18.85■□□□□ 0.61
SNX18Q96RF0 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
SNX18Q96RF0 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.85■□□□□ 0.61
SNX18Q96RF0 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC18.85■□□□□ 0.61
SNX18Q96RF0 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SNX18Q96RF0 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SNX18Q96RF0 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SNX18Q96RF0 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SNX18Q96RF0 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SNX18Q96RF0 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SNX18Q96RF0 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.85■□□□□ 0.61
SNX18Q96RF0 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
SNX18Q96RF0 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNX18Q96RF0 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNX18Q96RF0 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNX18Q96RF0 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNX18Q96RF0 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.84■□□□□ 0.61
SNX18Q96RF0 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNX18Q96RF0 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNX18Q96RF0 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNX18Q96RF0 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNX18Q96RF0 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNX18Q96RF0 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNX18Q96RF0 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNX18Q96RF0 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNX18Q96RF0 ASL-203ENST00000380839 1765 ntTSL 5 BASIC18.84■□□□□ 0.61
SNX18Q96RF0 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.84■□□□□ 0.61
SNX18Q96RF0 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.84■□□□□ 0.61
SNX18Q96RF0 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SNX18Q96RF0 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
SNX18Q96RF0 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SNX18Q96RF0 AC026271.2-201ENST00000428091 497 ntBASIC18.84■□□□□ 0.61
SNX18Q96RF0 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC18.84■□□□□ 0.61
SNX18Q96RF0 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNX18Q96RF0 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.84■□□□□ 0.61
SNX18Q96RF0 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNX18Q96RF0 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNX18Q96RF0 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNX18Q96RF0 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNX18Q96RF0 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNX18Q96RF0 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNX18Q96RF0 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNX18Q96RF0 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
SNX18Q96RF0 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SNX18Q96RF0 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SNX18Q96RF0 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
SNX18Q96RF0 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.83■□□□□ 0.61
SNX18Q96RF0 AL049796.1-201ENST00000565336 1766 ntBASIC18.83■□□□□ 0.61
SNX18Q96RF0 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SNX18Q96RF0 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.83■□□□□ 0.61
SNX18Q96RF0 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
SNX18Q96RF0 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
SNX18Q96RF0 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SNX18Q96RF0 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
SNX18Q96RF0 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.83■□□□□ 0.61
SNX18Q96RF0 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SNX18Q96RF0 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SNX18Q96RF0 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SNX18Q96RF0 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SNX18Q96RF0 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SNX18Q96RF0 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC18.83■□□□□ 0.6
SNX18Q96RF0 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
SNX18Q96RF0 MIR5787-201ENST00000611784 55 ntBASIC18.83■□□□□ 0.6
SNX18Q96RF0 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SNX18Q96RF0 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SNX18Q96RF0 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
SNX18Q96RF0 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SNX18Q96RF0 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SNX18Q96RF0 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SNX18Q96RF0 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNX18Q96RF0 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNX18Q96RF0 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNX18Q96RF0 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNX18Q96RF0 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC18.82■□□□□ 0.6
SNX18Q96RF0 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC18.82■□□□□ 0.6
SNX18Q96RF0 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNX18Q96RF0 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
SNX18Q96RF0 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
SNX18Q96RF0 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC18.82■□□□□ 0.6
SNX18Q96RF0 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC18.82■□□□□ 0.6
SNX18Q96RF0 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
SNX18Q96RF0 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.82■□□□□ 0.6
SNX18Q96RF0 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SNX18Q96RF0 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNX18Q96RF0 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNX18Q96RF0 AC055733.4-201ENST00000638462 1354 ntBASIC18.81■□□□□ 0.6
SNX18Q96RF0 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SNX18Q96RF0 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SNX18Q96RF0 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.81■□□□□ 0.6
SNX18Q96RF0 MFF-208ENST00000409616 1247 ntTSL 5 BASIC18.81■□□□□ 0.6
SNX18Q96RF0 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SNX18Q96RF0 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC18.81■□□□□ 0.6
SNX18Q96RF0 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNX18Q96RF0 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms