Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 AC073508.3-201ENST00000619697 1419 ntBASIC17.83■□□□□ 0.45
CSMD1Q96PZ7 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CSMD1Q96PZ7 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CSMD1Q96PZ7 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CSMD1Q96PZ7 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.45
CSMD1Q96PZ7 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CSMD1Q96PZ7 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC17.83■□□□□ 0.44
CSMD1Q96PZ7 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC17.83■□□□□ 0.44
CSMD1Q96PZ7 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
CSMD1Q96PZ7 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC17.83■□□□□ 0.44
CSMD1Q96PZ7 TOLLIP-AS1-201ENST00000530897 939 ntBASIC17.83■□□□□ 0.44
CSMD1Q96PZ7 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC17.83■□□□□ 0.44
CSMD1Q96PZ7 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CSMD1Q96PZ7 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CSMD1Q96PZ7 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.83■□□□□ 0.44
CSMD1Q96PZ7 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.83■□□□□ 0.44
CSMD1Q96PZ7 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CSMD1Q96PZ7 COMT-203ENST00000403184 2217 ntTSL 2 BASIC17.83■□□□□ 0.44
CSMD1Q96PZ7 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CSMD1Q96PZ7 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC17.83■□□□□ 0.44
CSMD1Q96PZ7 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.83■□□□□ 0.44
CSMD1Q96PZ7 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CSMD1Q96PZ7 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.83■□□□□ 0.44
CSMD1Q96PZ7 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC17.83■□□□□ 0.44
CSMD1Q96PZ7 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CSMD1Q96PZ7 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CSMD1Q96PZ7 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CSMD1Q96PZ7 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC17.82■□□□□ 0.44
CSMD1Q96PZ7 TPM4P1-201ENST00000436100 807 ntBASIC17.82■□□□□ 0.44
CSMD1Q96PZ7 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.82■□□□□ 0.44
CSMD1Q96PZ7 NTF6B-201ENST00000591913 560 ntBASIC17.82■□□□□ 0.44
CSMD1Q96PZ7 MTDHP1-201ENST00000605323 784 ntBASIC17.82■□□□□ 0.44
CSMD1Q96PZ7 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC17.82■□□□□ 0.44
CSMD1Q96PZ7 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CSMD1Q96PZ7 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CSMD1Q96PZ7 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CSMD1Q96PZ7 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC17.82■□□□□ 0.44
CSMD1Q96PZ7 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CSMD1Q96PZ7 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.82■□□□□ 0.44
CSMD1Q96PZ7 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CSMD1Q96PZ7 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CSMD1Q96PZ7 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC17.82■□□□□ 0.44
CSMD1Q96PZ7 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CSMD1Q96PZ7 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CSMD1Q96PZ7 SERF2-207ENST00000409614 582 ntTSL 2 BASIC17.81■□□□□ 0.44
CSMD1Q96PZ7 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC17.81■□□□□ 0.44
CSMD1Q96PZ7 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CSMD1Q96PZ7 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CSMD1Q96PZ7 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC17.81■□□□□ 0.44
CSMD1Q96PZ7 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CSMD1Q96PZ7 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC17.81■□□□□ 0.44
CSMD1Q96PZ7 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CSMD1Q96PZ7 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.81■□□□□ 0.44
CSMD1Q96PZ7 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CSMD1Q96PZ7 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC17.81■□□□□ 0.44
CSMD1Q96PZ7 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
CSMD1Q96PZ7 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CSMD1Q96PZ7 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CSMD1Q96PZ7 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CSMD1Q96PZ7 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CSMD1Q96PZ7 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CSMD1Q96PZ7 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CSMD1Q96PZ7 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.81■□□□□ 0.44
CSMD1Q96PZ7 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CSMD1Q96PZ7 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CSMD1Q96PZ7 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CSMD1Q96PZ7 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CSMD1Q96PZ7 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
CSMD1Q96PZ7 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.8■□□□□ 0.44
CSMD1Q96PZ7 AC124016.1-201ENST00000609552 612 ntBASIC17.8■□□□□ 0.44
CSMD1Q96PZ7 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CSMD1Q96PZ7 KRT16P2-201ENST00000414673 1423 ntBASIC17.8■□□□□ 0.44
CSMD1Q96PZ7 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC17.8■□□□□ 0.44
CSMD1Q96PZ7 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CSMD1Q96PZ7 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CSMD1Q96PZ7 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CSMD1Q96PZ7 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
CSMD1Q96PZ7 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC17.8■□□□□ 0.44
CSMD1Q96PZ7 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC17.8■□□□□ 0.44
CSMD1Q96PZ7 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC17.8■□□□□ 0.44
CSMD1Q96PZ7 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.8■□□□□ 0.44
CSMD1Q96PZ7 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
CSMD1Q96PZ7 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC17.8■□□□□ 0.44
CSMD1Q96PZ7 LINC01960-201ENST00000563759 1884 ntBASIC17.79■□□□□ 0.44
CSMD1Q96PZ7 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CSMD1Q96PZ7 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CSMD1Q96PZ7 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.79■□□□□ 0.44
CSMD1Q96PZ7 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.79■□□□□ 0.44
CSMD1Q96PZ7 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CSMD1Q96PZ7 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CSMD1Q96PZ7 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC17.79■□□□□ 0.44
CSMD1Q96PZ7 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CSMD1Q96PZ7 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CSMD1Q96PZ7 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC17.79■□□□□ 0.44
CSMD1Q96PZ7 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC17.79■□□□□ 0.44
CSMD1Q96PZ7 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CSMD1Q96PZ7 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC17.79■□□□□ 0.44
CSMD1Q96PZ7 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CSMD1Q96PZ7 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CSMD1Q96PZ7 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms