Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 UBE2SP1-201ENST00000450587 669 ntBASIC19.94■□□□□ 0.78
SLC46A1Q96NT5 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC19.94■□□□□ 0.78
SLC46A1Q96NT5 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.94■□□□□ 0.78
SLC46A1Q96NT5 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SLC46A1Q96NT5 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SLC46A1Q96NT5 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
SLC46A1Q96NT5 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
SLC46A1Q96NT5 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SLC46A1Q96NT5 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SLC46A1Q96NT5 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SLC46A1Q96NT5 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.93■□□□□ 0.78
SLC46A1Q96NT5 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.93■□□□□ 0.78
SLC46A1Q96NT5 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.93■□□□□ 0.78
SLC46A1Q96NT5 AC061975.6-201ENST00000579045 1553 ntBASIC19.93■□□□□ 0.78
SLC46A1Q96NT5 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SLC46A1Q96NT5 AC008550.1-201ENST00000511500 884 ntBASIC19.93■□□□□ 0.78
SLC46A1Q96NT5 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.93■□□□□ 0.78
SLC46A1Q96NT5 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.93■□□□□ 0.78
SLC46A1Q96NT5 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.93■□□□□ 0.78
SLC46A1Q96NT5 USP36-216ENST00000589424 970 ntTSL 5 BASIC19.93■□□□□ 0.78
SLC46A1Q96NT5 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.93■□□□□ 0.78
SLC46A1Q96NT5 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SLC46A1Q96NT5 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SLC46A1Q96NT5 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SLC46A1Q96NT5 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.92■□□□□ 0.78
SLC46A1Q96NT5 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SLC46A1Q96NT5 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SLC46A1Q96NT5 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
SLC46A1Q96NT5 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.92■□□□□ 0.78
SLC46A1Q96NT5 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SLC46A1Q96NT5 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SLC46A1Q96NT5 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SLC46A1Q96NT5 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
SLC46A1Q96NT5 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SLC46A1Q96NT5 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SLC46A1Q96NT5 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SLC46A1Q96NT5 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SLC46A1Q96NT5 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.92■□□□□ 0.78
SLC46A1Q96NT5 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC19.92■□□□□ 0.78
SLC46A1Q96NT5 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SLC46A1Q96NT5 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
SLC46A1Q96NT5 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SLC46A1Q96NT5 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.92■□□□□ 0.78
SLC46A1Q96NT5 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.92■□□□□ 0.78
SLC46A1Q96NT5 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC19.92■□□□□ 0.78
SLC46A1Q96NT5 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SLC46A1Q96NT5 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SLC46A1Q96NT5 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SLC46A1Q96NT5 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.91■□□□□ 0.78
SLC46A1Q96NT5 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.91■□□□□ 0.78
SLC46A1Q96NT5 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.91■□□□□ 0.78
SLC46A1Q96NT5 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SLC46A1Q96NT5 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC19.91■□□□□ 0.78
SLC46A1Q96NT5 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.91■□□□□ 0.78
SLC46A1Q96NT5 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC19.91■□□□□ 0.78
SLC46A1Q96NT5 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
SLC46A1Q96NT5 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SLC46A1Q96NT5 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SLC46A1Q96NT5 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SLC46A1Q96NT5 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SLC46A1Q96NT5 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SLC46A1Q96NT5 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.9■□□□□ 0.78
SLC46A1Q96NT5 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.9■□□□□ 0.78
SLC46A1Q96NT5 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SLC46A1Q96NT5 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.9■□□□□ 0.78
SLC46A1Q96NT5 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SLC46A1Q96NT5 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.9■□□□□ 0.78
SLC46A1Q96NT5 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.9■□□□□ 0.78
SLC46A1Q96NT5 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
SLC46A1Q96NT5 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.9■□□□□ 0.78
SLC46A1Q96NT5 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.9■□□□□ 0.78
SLC46A1Q96NT5 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.9■□□□□ 0.78
SLC46A1Q96NT5 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.9■□□□□ 0.78
SLC46A1Q96NT5 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.9■□□□□ 0.78
SLC46A1Q96NT5 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SLC46A1Q96NT5 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
SLC46A1Q96NT5 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SLC46A1Q96NT5 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.9■□□□□ 0.78
SLC46A1Q96NT5 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.9■□□□□ 0.78
SLC46A1Q96NT5 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
SLC46A1Q96NT5 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.78
SLC46A1Q96NT5 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
SLC46A1Q96NT5 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SLC46A1Q96NT5 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
SLC46A1Q96NT5 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.89■□□□□ 0.77
SLC46A1Q96NT5 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
SLC46A1Q96NT5 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SLC46A1Q96NT5 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
SLC46A1Q96NT5 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.89■□□□□ 0.77
SLC46A1Q96NT5 KRT17P1-201ENST00000399211 1546 ntBASIC19.89■□□□□ 0.77
SLC46A1Q96NT5 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SLC46A1Q96NT5 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.89■□□□□ 0.77
SLC46A1Q96NT5 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.89■□□□□ 0.77
SLC46A1Q96NT5 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19.89■□□□□ 0.77
SLC46A1Q96NT5 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
SLC46A1Q96NT5 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SLC46A1Q96NT5 AC008403.3-201ENST00000598924 454 ntBASIC19.89■□□□□ 0.77
SLC46A1Q96NT5 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SLC46A1Q96NT5 AL359736.2-201ENST00000621992 437 ntBASIC19.89■□□□□ 0.77
SLC46A1Q96NT5 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms