Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
CFAP54Q96N23 AC091076.1-201ENST00000610741 619 ntBASIC20.57■□□□□ 0.88
CFAP54Q96N23 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CFAP54Q96N23 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CFAP54Q96N23 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
CFAP54Q96N23 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
CFAP54Q96N23 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CFAP54Q96N23 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CFAP54Q96N23 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CFAP54Q96N23 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
CFAP54Q96N23 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CFAP54Q96N23 ISCU-203ENST00000431221 799 ntTSL 2 BASIC20.56■□□□□ 0.88
CFAP54Q96N23 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CFAP54Q96N23 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CFAP54Q96N23 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CFAP54Q96N23 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CFAP54Q96N23 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CFAP54Q96N23 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CFAP54Q96N23 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.56■□□□□ 0.88
CFAP54Q96N23 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CFAP54Q96N23 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CFAP54Q96N23 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.56■□□□□ 0.88
CFAP54Q96N23 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CFAP54Q96N23 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.55■□□□□ 0.88
CFAP54Q96N23 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CFAP54Q96N23 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.55■□□□□ 0.88
CFAP54Q96N23 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC20.55■□□□□ 0.88
CFAP54Q96N23 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.55■□□□□ 0.88
CFAP54Q96N23 KRT18P22-201ENST00000402024 1347 ntBASIC20.55■□□□□ 0.88
CFAP54Q96N23 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.55■□□□□ 0.88
CFAP54Q96N23 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CFAP54Q96N23 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CFAP54Q96N23 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CFAP54Q96N23 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CFAP54Q96N23 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CFAP54Q96N23 KRT18P48-201ENST00000434763 852 ntBASIC20.55■□□□□ 0.88
CFAP54Q96N23 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CFAP54Q96N23 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CFAP54Q96N23 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.55■□□□□ 0.88
CFAP54Q96N23 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CFAP54Q96N23 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CFAP54Q96N23 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CFAP54Q96N23 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CFAP54Q96N23 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.55■□□□□ 0.88
CFAP54Q96N23 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.55■□□□□ 0.88
CFAP54Q96N23 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CFAP54Q96N23 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.55■□□□□ 0.88
CFAP54Q96N23 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
CFAP54Q96N23 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CFAP54Q96N23 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CFAP54Q96N23 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CFAP54Q96N23 VPS72-207ENST00000640458 689 ntTSL 5 BASIC20.55■□□□□ 0.88
CFAP54Q96N23 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.54■□□□□ 0.88
CFAP54Q96N23 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CFAP54Q96N23 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CFAP54Q96N23 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CFAP54Q96N23 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CFAP54Q96N23 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CFAP54Q96N23 MMP23A-201ENST00000234610 1017 ntBASIC20.54■□□□□ 0.88
CFAP54Q96N23 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CFAP54Q96N23 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CFAP54Q96N23 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC20.54■□□□□ 0.88
CFAP54Q96N23 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
CFAP54Q96N23 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CFAP54Q96N23 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CFAP54Q96N23 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CFAP54Q96N23 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CFAP54Q96N23 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CFAP54Q96N23 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CFAP54Q96N23 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CFAP54Q96N23 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CFAP54Q96N23 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
CFAP54Q96N23 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CFAP54Q96N23 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CFAP54Q96N23 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.53■□□□□ 0.88
CFAP54Q96N23 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC20.53■□□□□ 0.88
CFAP54Q96N23 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.53■□□□□ 0.88
CFAP54Q96N23 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CFAP54Q96N23 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.53■□□□□ 0.88
CFAP54Q96N23 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.53■□□□□ 0.88
CFAP54Q96N23 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
CFAP54Q96N23 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC20.53■□□□□ 0.88
CFAP54Q96N23 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
CFAP54Q96N23 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC20.53■□□□□ 0.88
CFAP54Q96N23 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CFAP54Q96N23 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.53■□□□□ 0.88
CFAP54Q96N23 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CFAP54Q96N23 OR7E47P-201ENST00000546390 1422 ntBASIC20.53■□□□□ 0.88
CFAP54Q96N23 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CFAP54Q96N23 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CFAP54Q96N23 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CFAP54Q96N23 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
CFAP54Q96N23 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.52■□□□□ 0.88
CFAP54Q96N23 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.52■□□□□ 0.88
CFAP54Q96N23 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.88
CFAP54Q96N23 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CFAP54Q96N23 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CFAP54Q96N23 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CFAP54Q96N23 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CFAP54Q96N23 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC20.52■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms