Protein–RNA interactions for Protein: Q96MT3

PRICKLE1, Prickle-like protein 1, humanhuman

Predicted RBP Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1Q96MT3 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC21.51■■□□□ 1.03
PRICKLE1Q96MT3 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC21.51■■□□□ 1.03
PRICKLE1Q96MT3 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
PRICKLE1Q96MT3 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC21.51■■□□□ 1.03
PRICKLE1Q96MT3 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC21.51■■□□□ 1.03
PRICKLE1Q96MT3 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC21.51■■□□□ 1.03
PRICKLE1Q96MT3 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PRICKLE1Q96MT3 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PRICKLE1Q96MT3 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PRICKLE1Q96MT3 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PRICKLE1Q96MT3 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC21.5■■□□□ 1.03
PRICKLE1Q96MT3 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PRICKLE1Q96MT3 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
PRICKLE1Q96MT3 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PRICKLE1Q96MT3 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.5■■□□□ 1.03
PRICKLE1Q96MT3 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PRICKLE1Q96MT3 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PRICKLE1Q96MT3 GUSBP6-202ENST00000438529 1198 ntBASIC21.5■■□□□ 1.03
PRICKLE1Q96MT3 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC21.5■■□□□ 1.03
PRICKLE1Q96MT3 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC21.5■■□□□ 1.03
PRICKLE1Q96MT3 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
PRICKLE1Q96MT3 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PRICKLE1Q96MT3 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
PRICKLE1Q96MT3 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PRICKLE1Q96MT3 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PRICKLE1Q96MT3 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.49■■□□□ 1.03
PRICKLE1Q96MT3 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PRICKLE1Q96MT3 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC21.49■■□□□ 1.03
PRICKLE1Q96MT3 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.49■■□□□ 1.03
PRICKLE1Q96MT3 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PRICKLE1Q96MT3 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PRICKLE1Q96MT3 METTL15-202ENST00000403099 795 ntTSL 5 BASIC21.49■■□□□ 1.03
PRICKLE1Q96MT3 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC21.49■■□□□ 1.03
PRICKLE1Q96MT3 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PRICKLE1Q96MT3 AL121832.2-201ENST00000610979 668 ntBASIC21.49■■□□□ 1.03
PRICKLE1Q96MT3 AC244015.2-201ENST00000616358 1861 ntBASIC21.49■■□□□ 1.03
PRICKLE1Q96MT3 AL137060.1-201ENST00000618151 2648 ntBASIC21.49■■□□□ 1.03
PRICKLE1Q96MT3 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC21.48■■□□□ 1.03
PRICKLE1Q96MT3 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PRICKLE1Q96MT3 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
PRICKLE1Q96MT3 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PRICKLE1Q96MT3 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PRICKLE1Q96MT3 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PRICKLE1Q96MT3 GPX1P1-201ENST00000388829 606 ntBASIC21.48■■□□□ 1.03
PRICKLE1Q96MT3 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
PRICKLE1Q96MT3 AC245052.3-201ENST00000450182 901 ntBASIC21.48■■□□□ 1.03
PRICKLE1Q96MT3 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
PRICKLE1Q96MT3 AL109923.1-201ENST00000618799 583 ntBASIC21.48■■□□□ 1.03
PRICKLE1Q96MT3 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PRICKLE1Q96MT3 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.48■■□□□ 1.03
PRICKLE1Q96MT3 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PRICKLE1Q96MT3 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
PRICKLE1Q96MT3 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PRICKLE1Q96MT3 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.47■■□□□ 1.03
PRICKLE1Q96MT3 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PRICKLE1Q96MT3 AC091799.1-201ENST00000422823 811 ntBASIC21.47■■□□□ 1.03
PRICKLE1Q96MT3 AC083906.2-201ENST00000511578 360 ntBASIC21.47■■□□□ 1.03
PRICKLE1Q96MT3 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC21.47■■□□□ 1.03
PRICKLE1Q96MT3 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC21.47■■□□□ 1.03
PRICKLE1Q96MT3 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PRICKLE1Q96MT3 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PRICKLE1Q96MT3 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
PRICKLE1Q96MT3 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
PRICKLE1Q96MT3 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.47■■□□□ 1.03
PRICKLE1Q96MT3 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PRICKLE1Q96MT3 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PRICKLE1Q96MT3 AL121603.2-201ENST00000557373 2117 ntBASIC21.46■■□□□ 1.03
PRICKLE1Q96MT3 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC21.46■■□□□ 1.03
PRICKLE1Q96MT3 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PRICKLE1Q96MT3 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PRICKLE1Q96MT3 CD44-222ENST00000526025 1052 ntTSL 2 BASIC21.46■■□□□ 1.03
PRICKLE1Q96MT3 OAS3-207ENST00000551007 998 ntTSL 2 BASIC21.46■■□□□ 1.03
PRICKLE1Q96MT3 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PRICKLE1Q96MT3 AC016405.3-201ENST00000607710 860 ntBASIC21.46■■□□□ 1.03
PRICKLE1Q96MT3 GAMT-205ENST00000640762 751 ntTSL 5 BASIC21.46■■□□□ 1.03
PRICKLE1Q96MT3 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
PRICKLE1Q96MT3 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
PRICKLE1Q96MT3 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PRICKLE1Q96MT3 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.46■■□□□ 1.03
PRICKLE1Q96MT3 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PRICKLE1Q96MT3 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PRICKLE1Q96MT3 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
PRICKLE1Q96MT3 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PRICKLE1Q96MT3 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
PRICKLE1Q96MT3 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
PRICKLE1Q96MT3 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
PRICKLE1Q96MT3 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PRICKLE1Q96MT3 TSPY6P-201ENST00000448518 926 ntBASIC21.45■■□□□ 1.02
PRICKLE1Q96MT3 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21.45■■□□□ 1.02
PRICKLE1Q96MT3 AC133552.2-202ENST00000575694 574 ntBASIC21.45■■□□□ 1.02
PRICKLE1Q96MT3 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PRICKLE1Q96MT3 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC21.45■■□□□ 1.02
PRICKLE1Q96MT3 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
PRICKLE1Q96MT3 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PRICKLE1Q96MT3 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
PRICKLE1Q96MT3 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PRICKLE1Q96MT3 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PRICKLE1Q96MT3 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
PRICKLE1Q96MT3 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC21.44■■□□□ 1.02
PRICKLE1Q96MT3 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms