Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
UBE2E3Q969T4 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
UBE2E3Q969T4 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
UBE2E3Q969T4 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
UBE2E3Q969T4 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
UBE2E3Q969T4 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.97■□□□□ 0.79
UBE2E3Q969T4 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
UBE2E3Q969T4 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
UBE2E3Q969T4 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.97■□□□□ 0.79
UBE2E3Q969T4 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
UBE2E3Q969T4 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
UBE2E3Q969T4 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
UBE2E3Q969T4 AC121338.2-201ENST00000622535 1744 ntBASIC19.96■□□□□ 0.79
UBE2E3Q969T4 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
UBE2E3Q969T4 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC19.96■□□□□ 0.79
UBE2E3Q969T4 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
UBE2E3Q969T4 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
UBE2E3Q969T4 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.96■□□□□ 0.79
UBE2E3Q969T4 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.96■□□□□ 0.79
UBE2E3Q969T4 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.96■□□□□ 0.79
UBE2E3Q969T4 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.96■□□□□ 0.79
UBE2E3Q969T4 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
UBE2E3Q969T4 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
UBE2E3Q969T4 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
UBE2E3Q969T4 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
UBE2E3Q969T4 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
UBE2E3Q969T4 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
UBE2E3Q969T4 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
UBE2E3Q969T4 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.96■□□□□ 0.79
UBE2E3Q969T4 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
UBE2E3Q969T4 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
UBE2E3Q969T4 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
UBE2E3Q969T4 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.95■□□□□ 0.78
UBE2E3Q969T4 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
UBE2E3Q969T4 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
UBE2E3Q969T4 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
UBE2E3Q969T4 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
UBE2E3Q969T4 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.95■□□□□ 0.78
UBE2E3Q969T4 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
UBE2E3Q969T4 SLC7A5P2-201ENST00000553010 536 ntBASIC19.95■□□□□ 0.78
UBE2E3Q969T4 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.95■□□□□ 0.78
UBE2E3Q969T4 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
UBE2E3Q969T4 NTF6G-201ENST00000591094 616 ntBASIC19.95■□□□□ 0.78
UBE2E3Q969T4 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.95■□□□□ 0.78
UBE2E3Q969T4 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.95■□□□□ 0.78
UBE2E3Q969T4 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.95■□□□□ 0.78
UBE2E3Q969T4 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.95■□□□□ 0.78
UBE2E3Q969T4 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
UBE2E3Q969T4 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
UBE2E3Q969T4 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
UBE2E3Q969T4 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
UBE2E3Q969T4 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.94■□□□□ 0.78
UBE2E3Q969T4 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.94■□□□□ 0.78
UBE2E3Q969T4 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
UBE2E3Q969T4 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
UBE2E3Q969T4 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.94■□□□□ 0.78
UBE2E3Q969T4 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
UBE2E3Q969T4 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
UBE2E3Q969T4 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
UBE2E3Q969T4 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
UBE2E3Q969T4 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
UBE2E3Q969T4 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.94■□□□□ 0.78
UBE2E3Q969T4 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
UBE2E3Q969T4 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
UBE2E3Q969T4 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.94■□□□□ 0.78
UBE2E3Q969T4 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
UBE2E3Q969T4 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
UBE2E3Q969T4 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
UBE2E3Q969T4 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
UBE2E3Q969T4 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.93■□□□□ 0.78
UBE2E3Q969T4 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
UBE2E3Q969T4 AC087623.3-201ENST00000607047 1098 ntBASIC19.93■□□□□ 0.78
UBE2E3Q969T4 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
UBE2E3Q969T4 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.93■□□□□ 0.78
UBE2E3Q969T4 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.93■□□□□ 0.78
UBE2E3Q969T4 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
UBE2E3Q969T4 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.93■□□□□ 0.78
UBE2E3Q969T4 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
UBE2E3Q969T4 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
UBE2E3Q969T4 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
UBE2E3Q969T4 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.92■□□□□ 0.78
UBE2E3Q969T4 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
UBE2E3Q969T4 AC006128.1-201ENST00000624704 1661 ntBASIC19.92■□□□□ 0.78
UBE2E3Q969T4 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
UBE2E3Q969T4 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
UBE2E3Q969T4 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.92■□□□□ 0.78
UBE2E3Q969T4 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
UBE2E3Q969T4 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.92■□□□□ 0.78
UBE2E3Q969T4 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.92■□□□□ 0.78
UBE2E3Q969T4 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.92■□□□□ 0.78
UBE2E3Q969T4 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.92■□□□□ 0.78
UBE2E3Q969T4 RARRES2P11-201ENST00000635158 484 ntBASIC19.92■□□□□ 0.78
UBE2E3Q969T4 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
UBE2E3Q969T4 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.92■□□□□ 0.78
UBE2E3Q969T4 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
UBE2E3Q969T4 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
UBE2E3Q969T4 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
UBE2E3Q969T4 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.92■□□□□ 0.78
UBE2E3Q969T4 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.92■□□□□ 0.78
UBE2E3Q969T4 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms