Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC18.66■□□□□ 0.58
PTP4A1Q93096 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC18.66■□□□□ 0.58
PTP4A1Q93096 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PTP4A1Q93096 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
PTP4A1Q93096 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PTP4A1Q93096 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC18.66■□□□□ 0.58
PTP4A1Q93096 AC027702.1-201ENST00000563810 1770 ntBASIC18.65■□□□□ 0.58
PTP4A1Q93096 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.65■□□□□ 0.58
PTP4A1Q93096 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTP4A1Q93096 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
PTP4A1Q93096 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC18.65■□□□□ 0.58
PTP4A1Q93096 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTP4A1Q93096 LHPP-203ENST00000392757 840 ntTSL 3 BASIC18.65■□□□□ 0.58
PTP4A1Q93096 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC18.65■□□□□ 0.58
PTP4A1Q93096 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
PTP4A1Q93096 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
PTP4A1Q93096 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTP4A1Q93096 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
PTP4A1Q93096 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTP4A1Q93096 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
PTP4A1Q93096 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
PTP4A1Q93096 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
PTP4A1Q93096 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
PTP4A1Q93096 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTP4A1Q93096 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTP4A1Q93096 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
PTP4A1Q93096 HYI-206ENST00000372434 1025 ntTSL 5 BASIC18.64■□□□□ 0.57
PTP4A1Q93096 EBPL-204ENST00000378272 766 ntTSL 3 BASIC18.64■□□□□ 0.57
PTP4A1Q93096 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PTP4A1Q93096 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
PTP4A1Q93096 AC105233.4-201ENST00000642045 216 ntBASIC18.64■□□□□ 0.57
PTP4A1Q93096 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
PTP4A1Q93096 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
PTP4A1Q93096 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTP4A1Q93096 TSPY26P-201ENST00000476365 1326 ntBASIC18.64■□□□□ 0.57
PTP4A1Q93096 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PTP4A1Q93096 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTP4A1Q93096 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
PTP4A1Q93096 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
PTP4A1Q93096 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTP4A1Q93096 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
PTP4A1Q93096 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.63■□□□□ 0.57
PTP4A1Q93096 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PTP4A1Q93096 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTP4A1Q93096 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
PTP4A1Q93096 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTP4A1Q93096 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTP4A1Q93096 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTP4A1Q93096 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTP4A1Q93096 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTP4A1Q93096 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
PTP4A1Q93096 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PTP4A1Q93096 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.63■□□□□ 0.57
PTP4A1Q93096 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC18.63■□□□□ 0.57
PTP4A1Q93096 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTP4A1Q93096 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTP4A1Q93096 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.63■□□□□ 0.57
PTP4A1Q93096 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTP4A1Q93096 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC18.63■□□□□ 0.57
PTP4A1Q93096 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
PTP4A1Q93096 BX005040.4-201ENST00000637145 1518 ntBASIC18.63■□□□□ 0.57
PTP4A1Q93096 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.63■□□□□ 0.57
PTP4A1Q93096 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.63■□□□□ 0.57
PTP4A1Q93096 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTP4A1Q93096 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTP4A1Q93096 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTP4A1Q93096 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PTP4A1Q93096 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTP4A1Q93096 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.62■□□□□ 0.57
PTP4A1Q93096 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PTP4A1Q93096 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTP4A1Q93096 FXN-202ENST00000396364 980 ntTSL 5 BASIC18.62■□□□□ 0.57
PTP4A1Q93096 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTP4A1Q93096 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
PTP4A1Q93096 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTP4A1Q93096 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTP4A1Q93096 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTP4A1Q93096 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTP4A1Q93096 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.62■□□□□ 0.57
PTP4A1Q93096 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.62■□□□□ 0.57
PTP4A1Q93096 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
PTP4A1Q93096 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTP4A1Q93096 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
PTP4A1Q93096 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTP4A1Q93096 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTP4A1Q93096 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PTP4A1Q93096 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTP4A1Q93096 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTP4A1Q93096 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTP4A1Q93096 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTP4A1Q93096 AC020907.5-201ENST00000624372 1936 ntBASIC18.61■□□□□ 0.57
PTP4A1Q93096 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.61■□□□□ 0.57
PTP4A1Q93096 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
PTP4A1Q93096 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.61■□□□□ 0.57
PTP4A1Q93096 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTP4A1Q93096 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.61■□□□□ 0.57
PTP4A1Q93096 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC18.61■□□□□ 0.57
PTP4A1Q93096 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
PTP4A1Q93096 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.61■□□□□ 0.57
PTP4A1Q93096 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms