Protein–RNA interactions for Protein: Q92600

CNOT9, CCR4-NOT transcription complex subunit 9, humanhuman

Known RBP Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9Q92600 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.12■□□□□ 0.65
CNOT9Q92600 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CNOT9Q92600 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.12■□□□□ 0.65
CNOT9Q92600 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.12■□□□□ 0.65
CNOT9Q92600 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CNOT9Q92600 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
CNOT9Q92600 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CNOT9Q92600 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CNOT9Q92600 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.11■□□□□ 0.65
CNOT9Q92600 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CNOT9Q92600 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CNOT9Q92600 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CNOT9Q92600 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.11■□□□□ 0.65
CNOT9Q92600 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CNOT9Q92600 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CNOT9Q92600 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CNOT9Q92600 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CNOT9Q92600 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CNOT9Q92600 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.11■□□□□ 0.65
CNOT9Q92600 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.11■□□□□ 0.65
CNOT9Q92600 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CNOT9Q92600 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CNOT9Q92600 AC010141.2-201ENST00000452426 721 ntBASIC19.11■□□□□ 0.65
CNOT9Q92600 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CNOT9Q92600 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.11■□□□□ 0.65
CNOT9Q92600 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CNOT9Q92600 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.11■□□□□ 0.65
CNOT9Q92600 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
CNOT9Q92600 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CNOT9Q92600 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CNOT9Q92600 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CNOT9Q92600 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CNOT9Q92600 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.11■□□□□ 0.65
CNOT9Q92600 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CNOT9Q92600 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CNOT9Q92600 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CNOT9Q92600 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CNOT9Q92600 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CNOT9Q92600 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
CNOT9Q92600 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CNOT9Q92600 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.1■□□□□ 0.65
CNOT9Q92600 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CNOT9Q92600 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.1■□□□□ 0.65
CNOT9Q92600 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.1■□□□□ 0.65
CNOT9Q92600 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.1■□□□□ 0.65
CNOT9Q92600 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CNOT9Q92600 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.1■□□□□ 0.65
CNOT9Q92600 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CNOT9Q92600 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CNOT9Q92600 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CNOT9Q92600 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.1■□□□□ 0.65
CNOT9Q92600 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CNOT9Q92600 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CNOT9Q92600 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CNOT9Q92600 AC004854.2-201ENST00000608450 1441 ntBASIC19.09■□□□□ 0.65
CNOT9Q92600 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CNOT9Q92600 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CNOT9Q92600 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CNOT9Q92600 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CNOT9Q92600 AC121338.2-201ENST00000622535 1744 ntBASIC19.09■□□□□ 0.65
CNOT9Q92600 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CNOT9Q92600 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CNOT9Q92600 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CNOT9Q92600 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CNOT9Q92600 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
CNOT9Q92600 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.09■□□□□ 0.65
CNOT9Q92600 AP001160.3-201ENST00000601484 763 ntBASIC19.09■□□□□ 0.65
CNOT9Q92600 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.09■□□□□ 0.65
CNOT9Q92600 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CNOT9Q92600 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CNOT9Q92600 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CNOT9Q92600 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.09■□□□□ 0.65
CNOT9Q92600 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
CNOT9Q92600 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.09■□□□□ 0.65
CNOT9Q92600 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CNOT9Q92600 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.09■□□□□ 0.65
CNOT9Q92600 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.09■□□□□ 0.65
CNOT9Q92600 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CNOT9Q92600 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CNOT9Q92600 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.08■□□□□ 0.65
CNOT9Q92600 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CNOT9Q92600 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.65
CNOT9Q92600 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.65
CNOT9Q92600 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CNOT9Q92600 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CNOT9Q92600 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CNOT9Q92600 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.08■□□□□ 0.64
CNOT9Q92600 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.08■□□□□ 0.64
CNOT9Q92600 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.08■□□□□ 0.64
CNOT9Q92600 DUX4L2-201ENST00000561772 1275 ntBASIC19.08■□□□□ 0.64
CNOT9Q92600 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.08■□□□□ 0.64
CNOT9Q92600 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.08■□□□□ 0.64
CNOT9Q92600 DUX4L6-201ENST00000626483 1275 ntBASIC19.08■□□□□ 0.64
CNOT9Q92600 DUX4L1-201ENST00000627662 1275 ntBASIC19.08■□□□□ 0.64
CNOT9Q92600 DUX4L8-201ENST00000629013 1275 ntBASIC19.08■□□□□ 0.64
CNOT9Q92600 DUX4L3-201ENST00000630187 1275 ntBASIC19.08■□□□□ 0.64
CNOT9Q92600 DUX4L7-201ENST00000630678 1275 ntBASIC19.08■□□□□ 0.64
CNOT9Q92600 DUX4L5-201ENST00000630834 1275 ntBASIC19.08■□□□□ 0.64
CNOT9Q92600 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CNOT9Q92600 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms