Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC14.21□□□□□ -0.13
ALMS1Q8TCU4 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC14.21□□□□□ -0.13
ALMS1Q8TCU4 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC14.21□□□□□ -0.13
ALMS1Q8TCU4 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ALMS1Q8TCU4 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
ALMS1Q8TCU4 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ALMS1Q8TCU4 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC14.21□□□□□ -0.13
ALMS1Q8TCU4 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ALMS1Q8TCU4 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ALMS1Q8TCU4 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC14.21□□□□□ -0.14
ALMS1Q8TCU4 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC14.2□□□□□ -0.14
ALMS1Q8TCU4 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
ALMS1Q8TCU4 TPM1-226ENST00000560959 925 ntTSL 2 BASIC14.2□□□□□ -0.14
ALMS1Q8TCU4 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC14.2□□□□□ -0.14
ALMS1Q8TCU4 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC14.2□□□□□ -0.14
ALMS1Q8TCU4 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
ALMS1Q8TCU4 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ALMS1Q8TCU4 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ALMS1Q8TCU4 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC14.2□□□□□ -0.14
ALMS1Q8TCU4 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC14.2□□□□□ -0.14
ALMS1Q8TCU4 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC14.2□□□□□ -0.14
ALMS1Q8TCU4 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ALMS1Q8TCU4 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ALMS1Q8TCU4 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC14.2□□□□□ -0.14
ALMS1Q8TCU4 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC14.2□□□□□ -0.14
ALMS1Q8TCU4 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ALMS1Q8TCU4 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC14.2□□□□□ -0.14
ALMS1Q8TCU4 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC14.2□□□□□ -0.14
ALMS1Q8TCU4 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
ALMS1Q8TCU4 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ALMS1Q8TCU4 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ALMS1Q8TCU4 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ALMS1Q8TCU4 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ALMS1Q8TCU4 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC14.19□□□□□ -0.14
ALMS1Q8TCU4 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
ALMS1Q8TCU4 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ALMS1Q8TCU4 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
ALMS1Q8TCU4 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC14.19□□□□□ -0.14
ALMS1Q8TCU4 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
ALMS1Q8TCU4 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ALMS1Q8TCU4 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
ALMS1Q8TCU4 GGT1-206ENST00000404223 952 ntTSL 2 BASIC14.19□□□□□ -0.14
ALMS1Q8TCU4 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC14.19□□□□□ -0.14
ALMS1Q8TCU4 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
ALMS1Q8TCU4 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ALMS1Q8TCU4 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ALMS1Q8TCU4 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ALMS1Q8TCU4 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ALMS1Q8TCU4 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC14.19□□□□□ -0.14
ALMS1Q8TCU4 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ALMS1Q8TCU4 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ALMS1Q8TCU4 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC14.19□□□□□ -0.14
ALMS1Q8TCU4 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC14.19□□□□□ -0.14
ALMS1Q8TCU4 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC14.19□□□□□ -0.14
ALMS1Q8TCU4 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ALMS1Q8TCU4 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ALMS1Q8TCU4 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC14.19□□□□□ -0.14
ALMS1Q8TCU4 P4HB-223ENST00000576390 439 ntTSL 4 BASIC14.19□□□□□ -0.14
ALMS1Q8TCU4 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
ALMS1Q8TCU4 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ALMS1Q8TCU4 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ALMS1Q8TCU4 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC14.18□□□□□ -0.14
ALMS1Q8TCU4 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
ALMS1Q8TCU4 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC14.18□□□□□ -0.14
ALMS1Q8TCU4 AC026471.5-201ENST00000615068 467 ntBASIC14.18□□□□□ -0.14
ALMS1Q8TCU4 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
ALMS1Q8TCU4 CRAT-202ENST00000393384 973 ntTSL 2 BASIC14.18□□□□□ -0.14
ALMS1Q8TCU4 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC14.18□□□□□ -0.14
ALMS1Q8TCU4 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
ALMS1Q8TCU4 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ALMS1Q8TCU4 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
ALMS1Q8TCU4 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC14.18□□□□□ -0.14
ALMS1Q8TCU4 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
ALMS1Q8TCU4 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
ALMS1Q8TCU4 RNF146-204ENST00000476956 884 ntTSL 2 BASIC14.18□□□□□ -0.14
ALMS1Q8TCU4 AP001412.1-201ENST00000608405 714 ntBASIC14.18□□□□□ -0.14
ALMS1Q8TCU4 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ALMS1Q8TCU4 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ALMS1Q8TCU4 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ALMS1Q8TCU4 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC14.17□□□□□ -0.14
ALMS1Q8TCU4 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ALMS1Q8TCU4 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ALMS1Q8TCU4 PTPA-214ENST00000423100 988 ntTSL 2 BASIC14.17□□□□□ -0.14
ALMS1Q8TCU4 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC14.17□□□□□ -0.14
ALMS1Q8TCU4 AL121894.2-201ENST00000602977 491 ntBASIC14.17□□□□□ -0.14
ALMS1Q8TCU4 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ALMS1Q8TCU4 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC14.17□□□□□ -0.14
ALMS1Q8TCU4 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC14.17□□□□□ -0.14
ALMS1Q8TCU4 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC14.17□□□□□ -0.14
ALMS1Q8TCU4 DUT-205ENST00000558813 769 ntTSL 2 BASIC14.17□□□□□ -0.14
ALMS1Q8TCU4 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC14.17□□□□□ -0.14
ALMS1Q8TCU4 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC14.17□□□□□ -0.14
ALMS1Q8TCU4 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC14.17□□□□□ -0.14
ALMS1Q8TCU4 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
ALMS1Q8TCU4 NXN-202ENST00000537628 1340 ntTSL 3 BASIC14.16□□□□□ -0.14
ALMS1Q8TCU4 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ALMS1Q8TCU4 AC245052.3-201ENST00000450182 901 ntBASIC14.16□□□□□ -0.14
ALMS1Q8TCU4 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ALMS1Q8TCU4 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
ALMS1Q8TCU4 AC137767.1-201ENST00000602918 1920 ntBASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms