Protein–RNA interactions for Protein: Q8NEB9

PIK3C3, Phosphatidylinositol 3-kinase catalytic subunit type 3, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C3Q8NEB9 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PIK3C3Q8NEB9 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
PIK3C3Q8NEB9 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
PIK3C3Q8NEB9 AP006587.3-201ENST00000525742 1516 ntBASIC19.42■□□□□ 0.7
PIK3C3Q8NEB9 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
PIK3C3Q8NEB9 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.42■□□□□ 0.7
PIK3C3Q8NEB9 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.42■□□□□ 0.7
PIK3C3Q8NEB9 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PIK3C3Q8NEB9 AC110285.6-201ENST00000617652 491 ntBASIC19.42■□□□□ 0.7
PIK3C3Q8NEB9 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PIK3C3Q8NEB9 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PIK3C3Q8NEB9 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
PIK3C3Q8NEB9 AC006128.1-201ENST00000624704 1661 ntBASIC19.42■□□□□ 0.7
PIK3C3Q8NEB9 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PIK3C3Q8NEB9 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PIK3C3Q8NEB9 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.42■□□□□ 0.7
PIK3C3Q8NEB9 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PIK3C3Q8NEB9 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PIK3C3Q8NEB9 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.41■□□□□ 0.7
PIK3C3Q8NEB9 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
PIK3C3Q8NEB9 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PIK3C3Q8NEB9 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PIK3C3Q8NEB9 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
PIK3C3Q8NEB9 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PIK3C3Q8NEB9 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PIK3C3Q8NEB9 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PIK3C3Q8NEB9 AL139246.5-201ENST00000606645 996 ntBASIC19.41■□□□□ 0.7
PIK3C3Q8NEB9 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.41■□□□□ 0.7
PIK3C3Q8NEB9 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
PIK3C3Q8NEB9 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PIK3C3Q8NEB9 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PIK3C3Q8NEB9 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
PIK3C3Q8NEB9 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PIK3C3Q8NEB9 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.41■□□□□ 0.7
PIK3C3Q8NEB9 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.41■□□□□ 0.7
PIK3C3Q8NEB9 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PIK3C3Q8NEB9 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PIK3C3Q8NEB9 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PIK3C3Q8NEB9 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
PIK3C3Q8NEB9 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
PIK3C3Q8NEB9 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.4■□□□□ 0.7
PIK3C3Q8NEB9 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
PIK3C3Q8NEB9 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.4■□□□□ 0.7
PIK3C3Q8NEB9 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PIK3C3Q8NEB9 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.4■□□□□ 0.7
PIK3C3Q8NEB9 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.4■□□□□ 0.7
PIK3C3Q8NEB9 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.4■□□□□ 0.7
PIK3C3Q8NEB9 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
PIK3C3Q8NEB9 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.4■□□□□ 0.7
PIK3C3Q8NEB9 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.4■□□□□ 0.7
PIK3C3Q8NEB9 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PIK3C3Q8NEB9 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PIK3C3Q8NEB9 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
PIK3C3Q8NEB9 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PIK3C3Q8NEB9 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PIK3C3Q8NEB9 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PIK3C3Q8NEB9 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.4■□□□□ 0.7
PIK3C3Q8NEB9 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PIK3C3Q8NEB9 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
PIK3C3Q8NEB9 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.4■□□□□ 0.7
PIK3C3Q8NEB9 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.4■□□□□ 0.7
PIK3C3Q8NEB9 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PIK3C3Q8NEB9 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
PIK3C3Q8NEB9 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.4■□□□□ 0.7
PIK3C3Q8NEB9 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.7
PIK3C3Q8NEB9 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PIK3C3Q8NEB9 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PIK3C3Q8NEB9 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PIK3C3Q8NEB9 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PIK3C3Q8NEB9 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PIK3C3Q8NEB9 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PIK3C3Q8NEB9 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
PIK3C3Q8NEB9 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.39■□□□□ 0.69
PIK3C3Q8NEB9 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
PIK3C3Q8NEB9 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PIK3C3Q8NEB9 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
PIK3C3Q8NEB9 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PIK3C3Q8NEB9 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
PIK3C3Q8NEB9 BX842568.3-201ENST00000418104 571 ntBASIC19.39■□□□□ 0.69
PIK3C3Q8NEB9 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PIK3C3Q8NEB9 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
PIK3C3Q8NEB9 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PIK3C3Q8NEB9 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
PIK3C3Q8NEB9 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
PIK3C3Q8NEB9 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.39■□□□□ 0.69
PIK3C3Q8NEB9 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.39■□□□□ 0.69
PIK3C3Q8NEB9 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PIK3C3Q8NEB9 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PIK3C3Q8NEB9 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PIK3C3Q8NEB9 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
PIK3C3Q8NEB9 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PIK3C3Q8NEB9 EDA-201ENST00000338901 1233 ntBASIC19.38■□□□□ 0.69
PIK3C3Q8NEB9 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.38■□□□□ 0.69
PIK3C3Q8NEB9 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.38■□□□□ 0.69
PIK3C3Q8NEB9 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.38■□□□□ 0.69
PIK3C3Q8NEB9 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
PIK3C3Q8NEB9 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.38■□□□□ 0.69
PIK3C3Q8NEB9 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.38■□□□□ 0.69
PIK3C3Q8NEB9 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.38■□□□□ 0.69
PIK3C3Q8NEB9 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms