Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 PALM-207ENST00000590161 2137 ntTSL 4 BASIC17.17■□□□□ 0.34
ZNF439Q8NDP4 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC17.17■□□□□ 0.34
ZNF439Q8NDP4 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ZNF439Q8NDP4 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZNF439Q8NDP4 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ZNF439Q8NDP4 LINC02228-203ENST00000641970 1355 ntBASIC17.16■□□□□ 0.34
ZNF439Q8NDP4 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZNF439Q8NDP4 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.16■□□□□ 0.34
ZNF439Q8NDP4 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC17.16■□□□□ 0.34
ZNF439Q8NDP4 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
ZNF439Q8NDP4 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZNF439Q8NDP4 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC17.16■□□□□ 0.34
ZNF439Q8NDP4 ZNRF2P3-201ENST00000424200 374 ntBASIC17.16■□□□□ 0.34
ZNF439Q8NDP4 AC123595.1-201ENST00000440769 1046 ntBASIC17.16■□□□□ 0.34
ZNF439Q8NDP4 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC17.16■□□□□ 0.34
ZNF439Q8NDP4 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC17.16■□□□□ 0.34
ZNF439Q8NDP4 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC17.16■□□□□ 0.34
ZNF439Q8NDP4 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC17.16■□□□□ 0.34
ZNF439Q8NDP4 KRT87P-202ENST00000534226 1464 ntBASIC17.16■□□□□ 0.34
ZNF439Q8NDP4 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZNF439Q8NDP4 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZNF439Q8NDP4 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ZNF439Q8NDP4 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZNF439Q8NDP4 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ZNF439Q8NDP4 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
ZNF439Q8NDP4 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
ZNF439Q8NDP4 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
ZNF439Q8NDP4 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC17.15■□□□□ 0.34
ZNF439Q8NDP4 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ZNF439Q8NDP4 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC17.15■□□□□ 0.34
ZNF439Q8NDP4 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.15■□□□□ 0.34
ZNF439Q8NDP4 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
ZNF439Q8NDP4 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
ZNF439Q8NDP4 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ZNF439Q8NDP4 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ZNF439Q8NDP4 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC17.15■□□□□ 0.34
ZNF439Q8NDP4 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.15■□□□□ 0.34
ZNF439Q8NDP4 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
ZNF439Q8NDP4 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ZNF439Q8NDP4 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ZNF439Q8NDP4 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC17.14■□□□□ 0.33
ZNF439Q8NDP4 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
ZNF439Q8NDP4 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ZNF439Q8NDP4 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ZNF439Q8NDP4 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ZNF439Q8NDP4 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ZNF439Q8NDP4 YBX1P1-201ENST00000445822 960 ntBASIC17.14■□□□□ 0.33
ZNF439Q8NDP4 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ZNF439Q8NDP4 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC17.14■□□□□ 0.33
ZNF439Q8NDP4 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC17.14■□□□□ 0.33
ZNF439Q8NDP4 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ZNF439Q8NDP4 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
ZNF439Q8NDP4 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC17.14■□□□□ 0.33
ZNF439Q8NDP4 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
ZNF439Q8NDP4 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ZNF439Q8NDP4 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ZNF439Q8NDP4 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ZNF439Q8NDP4 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ZNF439Q8NDP4 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ZNF439Q8NDP4 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ZNF439Q8NDP4 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ZNF439Q8NDP4 TERF1P2-201ENST00000583350 1212 ntBASIC17.13■□□□□ 0.33
ZNF439Q8NDP4 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ZNF439Q8NDP4 SP2-202ENST00000613139 908 ntTSL 5 BASIC17.13■□□□□ 0.33
ZNF439Q8NDP4 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ZNF439Q8NDP4 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC17.13■□□□□ 0.33
ZNF439Q8NDP4 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
ZNF439Q8NDP4 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ZNF439Q8NDP4 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ZNF439Q8NDP4 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
ZNF439Q8NDP4 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ZNF439Q8NDP4 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF439Q8NDP4 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC17.12■□□□□ 0.33
ZNF439Q8NDP4 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF439Q8NDP4 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF439Q8NDP4 AC061975.6-201ENST00000579045 1553 ntBASIC17.12■□□□□ 0.33
ZNF439Q8NDP4 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC17.12■□□□□ 0.33
ZNF439Q8NDP4 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
ZNF439Q8NDP4 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF439Q8NDP4 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF439Q8NDP4 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF439Q8NDP4 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC17.12■□□□□ 0.33
ZNF439Q8NDP4 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF439Q8NDP4 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF439Q8NDP4 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF439Q8NDP4 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF439Q8NDP4 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF439Q8NDP4 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC17.12■□□□□ 0.33
ZNF439Q8NDP4 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF439Q8NDP4 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
ZNF439Q8NDP4 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF439Q8NDP4 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
ZNF439Q8NDP4 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
ZNF439Q8NDP4 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF439Q8NDP4 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
ZNF439Q8NDP4 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF439Q8NDP4 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF439Q8NDP4 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF439Q8NDP4 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC17.11■□□□□ 0.33
ZNF439Q8NDP4 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms