Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC168Q8NDH2 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC17.55■□□□□ 0.4
CCDC168Q8NDH2 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CCDC168Q8NDH2 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CCDC168Q8NDH2 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC168Q8NDH2 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC168Q8NDH2 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC168Q8NDH2 KRT8P9-201ENST00000558927 1449 ntBASIC17.54■□□□□ 0.4
CCDC168Q8NDH2 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC17.54■□□□□ 0.4
CCDC168Q8NDH2 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC168Q8NDH2 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
CCDC168Q8NDH2 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC168Q8NDH2 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CCDC168Q8NDH2 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.54■□□□□ 0.4
CCDC168Q8NDH2 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC168Q8NDH2 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC168Q8NDH2 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC17.54■□□□□ 0.4
CCDC168Q8NDH2 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC17.54■□□□□ 0.4
CCDC168Q8NDH2 AC120498.8-201ENST00000614275 531 ntBASIC17.54■□□□□ 0.4
CCDC168Q8NDH2 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC17.54■□□□□ 0.4
CCDC168Q8NDH2 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC17.53■□□□□ 0.4
CCDC168Q8NDH2 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC168Q8NDH2 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC168Q8NDH2 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC168Q8NDH2 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC168Q8NDH2 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC168Q8NDH2 TPM4P1-201ENST00000436100 807 ntBASIC17.53■□□□□ 0.4
CCDC168Q8NDH2 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.53■□□□□ 0.4
CCDC168Q8NDH2 KRT126P-201ENST00000549467 1181 ntBASIC17.53■□□□□ 0.4
CCDC168Q8NDH2 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC168Q8NDH2 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC168Q8NDH2 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
CCDC168Q8NDH2 KRT18P22-201ENST00000402024 1347 ntBASIC17.52■□□□□ 0.4
CCDC168Q8NDH2 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC168Q8NDH2 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
CCDC168Q8NDH2 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC168Q8NDH2 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC168Q8NDH2 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
CCDC168Q8NDH2 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC168Q8NDH2 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.52■□□□□ 0.4
CCDC168Q8NDH2 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC17.52■□□□□ 0.4
CCDC168Q8NDH2 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.52■□□□□ 0.4
CCDC168Q8NDH2 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.52■□□□□ 0.4
CCDC168Q8NDH2 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.52■□□□□ 0.4
CCDC168Q8NDH2 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC168Q8NDH2 AC061975.6-201ENST00000579045 1553 ntBASIC17.52■□□□□ 0.4
CCDC168Q8NDH2 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.39
CCDC168Q8NDH2 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CCDC168Q8NDH2 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
CCDC168Q8NDH2 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
CCDC168Q8NDH2 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
CCDC168Q8NDH2 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CCDC168Q8NDH2 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
CCDC168Q8NDH2 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
CCDC168Q8NDH2 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC168Q8NDH2 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC168Q8NDH2 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.51■□□□□ 0.39
CCDC168Q8NDH2 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC168Q8NDH2 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC168Q8NDH2 AC026471.5-201ENST00000615068 467 ntBASIC17.51■□□□□ 0.39
CCDC168Q8NDH2 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.51■□□□□ 0.39
CCDC168Q8NDH2 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
CCDC168Q8NDH2 MED17-227ENST00000640521 2047 ntTSL 5 BASIC17.51■□□□□ 0.39
CCDC168Q8NDH2 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC17.51■□□□□ 0.39
CCDC168Q8NDH2 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC168Q8NDH2 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.5■□□□□ 0.39
CCDC168Q8NDH2 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.5■□□□□ 0.39
CCDC168Q8NDH2 AL121894.2-201ENST00000602977 491 ntBASIC17.5■□□□□ 0.39
CCDC168Q8NDH2 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC168Q8NDH2 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC168Q8NDH2 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CCDC168Q8NDH2 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC17.5■□□□□ 0.39
CCDC168Q8NDH2 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC17.5■□□□□ 0.39
CCDC168Q8NDH2 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC168Q8NDH2 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC17.5■□□□□ 0.39
CCDC168Q8NDH2 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC168Q8NDH2 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC168Q8NDH2 KRT18P68-201ENST00000392293 1000 ntBASIC17.5■□□□□ 0.39
CCDC168Q8NDH2 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC168Q8NDH2 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.5■□□□□ 0.39
CCDC168Q8NDH2 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC17.5■□□□□ 0.39
CCDC168Q8NDH2 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CCDC168Q8NDH2 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.5■□□□□ 0.39
CCDC168Q8NDH2 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC168Q8NDH2 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC168Q8NDH2 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC168Q8NDH2 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC168Q8NDH2 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC168Q8NDH2 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC168Q8NDH2 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC168Q8NDH2 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CCDC168Q8NDH2 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CCDC168Q8NDH2 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC17.49■□□□□ 0.39
CCDC168Q8NDH2 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.49■□□□□ 0.39
CCDC168Q8NDH2 VMO1-204ENST00000441199 741 ntTSL 2 BASIC17.49■□□□□ 0.39
CCDC168Q8NDH2 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CCDC168Q8NDH2 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.49■□□□□ 0.39
CCDC168Q8NDH2 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC17.49■□□□□ 0.39
CCDC168Q8NDH2 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC168Q8NDH2 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms