Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC21.3■■□□□ 1
PAF1Q8N7H5 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PAF1Q8N7H5 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC21.3■■□□□ 1
PAF1Q8N7H5 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC21.3■■□□□ 1
PAF1Q8N7H5 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
PAF1Q8N7H5 AC010141.2-201ENST00000452426 721 ntBASIC21.3■■□□□ 1
PAF1Q8N7H5 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC21.3■■□□□ 1
PAF1Q8N7H5 RNF146-206ENST00000480444 843 ntTSL 2 BASIC21.3■■□□□ 1
PAF1Q8N7H5 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC21.3■■□□□ 1
PAF1Q8N7H5 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC21.3■■□□□ 1
PAF1Q8N7H5 EEF1DP3-203ENST00000566025 782 ntBASIC21.3■■□□□ 1
PAF1Q8N7H5 KRT18P61-201ENST00000585825 1298 ntBASIC21.3■■□□□ 1
PAF1Q8N7H5 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PAF1Q8N7H5 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.3■■□□□ 1
PAF1Q8N7H5 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC21.3■■□□□ 1
PAF1Q8N7H5 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
PAF1Q8N7H5 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.3■■□□□ 1
PAF1Q8N7H5 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
PAF1Q8N7H5 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
PAF1Q8N7H5 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC21.29■■□□□ 1
PAF1Q8N7H5 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.29■■□□□ 1
PAF1Q8N7H5 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PAF1Q8N7H5 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC21.29■■□□□ 1
PAF1Q8N7H5 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PAF1Q8N7H5 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
PAF1Q8N7H5 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC21.29■■□□□ 1
PAF1Q8N7H5 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC21.29■■□□□ 1
PAF1Q8N7H5 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC21.29■■□□□ 1
PAF1Q8N7H5 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC21.29■■□□□ 1
PAF1Q8N7H5 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PAF1Q8N7H5 SPI1-203ENST00000533030 661 ntTSL 2 BASIC21.29■■□□□ 1
PAF1Q8N7H5 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.29■■□□□ 1
PAF1Q8N7H5 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PAF1Q8N7H5 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
PAF1Q8N7H5 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
PAF1Q8N7H5 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.28■■□□□ 1
PAF1Q8N7H5 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.28■■□□□ 1
PAF1Q8N7H5 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PAF1Q8N7H5 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC21.28■■□□□ 1
PAF1Q8N7H5 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC21.28■■□□□ 1
PAF1Q8N7H5 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
PAF1Q8N7H5 AC004911.1-201ENST00000416316 871 ntBASIC21.28■■□□□ 1
PAF1Q8N7H5 KRT18P11-201ENST00000435214 1283 ntBASIC21.28■■□□□ 1
PAF1Q8N7H5 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC21.28■■□□□ 1
PAF1Q8N7H5 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
PAF1Q8N7H5 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PAF1Q8N7H5 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
PAF1Q8N7H5 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
PAF1Q8N7H5 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PAF1Q8N7H5 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PAF1Q8N7H5 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.28■■□□□ 1
PAF1Q8N7H5 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.27■■□□□ 1
PAF1Q8N7H5 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PAF1Q8N7H5 PARP1-202ENST00000366792 553 ntTSL 3 BASIC21.27■■□□□ 1
PAF1Q8N7H5 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.27■■□□□ 1
PAF1Q8N7H5 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
PAF1Q8N7H5 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC21.27■□□□□ 0.99
PAF1Q8N7H5 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC21.27■□□□□ 0.99
PAF1Q8N7H5 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.27■□□□□ 0.99
PAF1Q8N7H5 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
PAF1Q8N7H5 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PAF1Q8N7H5 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PAF1Q8N7H5 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.26■□□□□ 0.99
PAF1Q8N7H5 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
PAF1Q8N7H5 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
PAF1Q8N7H5 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PAF1Q8N7H5 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.26■□□□□ 0.99
PAF1Q8N7H5 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC21.26■□□□□ 0.99
PAF1Q8N7H5 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC21.26■□□□□ 0.99
PAF1Q8N7H5 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PAF1Q8N7H5 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.26■□□□□ 0.99
PAF1Q8N7H5 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PAF1Q8N7H5 POU5F1P4-201ENST00000413175 1085 ntBASIC21.26■□□□□ 0.99
PAF1Q8N7H5 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PAF1Q8N7H5 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC21.26■□□□□ 0.99
PAF1Q8N7H5 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC21.26■□□□□ 0.99
PAF1Q8N7H5 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC21.26■□□□□ 0.99
PAF1Q8N7H5 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC21.26■□□□□ 0.99
PAF1Q8N7H5 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
PAF1Q8N7H5 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PAF1Q8N7H5 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PAF1Q8N7H5 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
PAF1Q8N7H5 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PAF1Q8N7H5 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.25■□□□□ 0.99
PAF1Q8N7H5 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.25■□□□□ 0.99
PAF1Q8N7H5 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PAF1Q8N7H5 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PAF1Q8N7H5 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC21.25■□□□□ 0.99
PAF1Q8N7H5 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
PAF1Q8N7H5 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC21.25■□□□□ 0.99
PAF1Q8N7H5 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21.25■□□□□ 0.99
PAF1Q8N7H5 UBE2DNL-204ENST00000602536 740 ntBASIC21.25■□□□□ 0.99
PAF1Q8N7H5 BID-214ENST00000617586 542 ntTSL 5 BASIC21.25■□□□□ 0.99
PAF1Q8N7H5 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.25■□□□□ 0.99
PAF1Q8N7H5 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC21.25■□□□□ 0.99
PAF1Q8N7H5 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
PAF1Q8N7H5 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PAF1Q8N7H5 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
PAF1Q8N7H5 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PAF1Q8N7H5 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms