Protein–RNA interactions for Protein: Q8N5M1

ATPAF2, ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

Predictions only

Length 289 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2Q8N5M1 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC21.31■■□□□ 1
ATPAF2Q8N5M1 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
ATPAF2Q8N5M1 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
ATPAF2Q8N5M1 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.31■■□□□ 1
ATPAF2Q8N5M1 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.31■■□□□ 1
ATPAF2Q8N5M1 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.31■■□□□ 1
ATPAF2Q8N5M1 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ATPAF2Q8N5M1 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ATPAF2Q8N5M1 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC21.3■■□□□ 1
ATPAF2Q8N5M1 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
ATPAF2Q8N5M1 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
ATPAF2Q8N5M1 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
ATPAF2Q8N5M1 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC21.3■■□□□ 1
ATPAF2Q8N5M1 AC016769.1-201ENST00000409132 1010 ntBASIC21.3■■□□□ 1
ATPAF2Q8N5M1 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.3■■□□□ 1
ATPAF2Q8N5M1 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC21.3■■□□□ 1
ATPAF2Q8N5M1 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC21.3■■□□□ 1
ATPAF2Q8N5M1 SLC7A5P1-201ENST00000568957 537 ntBASIC21.3■■□□□ 1
ATPAF2Q8N5M1 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC21.3■■□□□ 1
ATPAF2Q8N5M1 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC21.3■■□□□ 1
ATPAF2Q8N5M1 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC21.3■■□□□ 1
ATPAF2Q8N5M1 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC21.3■■□□□ 1
ATPAF2Q8N5M1 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ATPAF2Q8N5M1 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC21.3■■□□□ 1
ATPAF2Q8N5M1 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC21.3■■□□□ 1
ATPAF2Q8N5M1 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ATPAF2Q8N5M1 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ATPAF2Q8N5M1 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.3■■□□□ 1
ATPAF2Q8N5M1 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
ATPAF2Q8N5M1 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ATPAF2Q8N5M1 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.29■■□□□ 1
ATPAF2Q8N5M1 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ATPAF2Q8N5M1 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.29■■□□□ 1
ATPAF2Q8N5M1 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
ATPAF2Q8N5M1 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC21.29■■□□□ 1
ATPAF2Q8N5M1 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
ATPAF2Q8N5M1 KRT18P11-201ENST00000435214 1283 ntBASIC21.29■■□□□ 1
ATPAF2Q8N5M1 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21.29■■□□□ 1
ATPAF2Q8N5M1 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC21.29■■□□□ 1
ATPAF2Q8N5M1 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC21.29■■□□□ 1
ATPAF2Q8N5M1 FGF8-207ENST00000618991 856 ntTSL 3 BASIC21.29■■□□□ 1
ATPAF2Q8N5M1 TFG-210ENST00000620299 1289 ntTSL 5 BASIC21.29■■□□□ 1
ATPAF2Q8N5M1 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC21.29■■□□□ 1
ATPAF2Q8N5M1 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
ATPAF2Q8N5M1 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ATPAF2Q8N5M1 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ATPAF2Q8N5M1 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ATPAF2Q8N5M1 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
ATPAF2Q8N5M1 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC21.29■■□□□ 1
ATPAF2Q8N5M1 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.29■■□□□ 1
ATPAF2Q8N5M1 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ATPAF2Q8N5M1 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ATPAF2Q8N5M1 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC21.28■■□□□ 1
ATPAF2Q8N5M1 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.28■■□□□ 1
ATPAF2Q8N5M1 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC21.28■■□□□ 1
ATPAF2Q8N5M1 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC21.28■■□□□ 1
ATPAF2Q8N5M1 RARRES2P11-201ENST00000635158 484 ntBASIC21.28■■□□□ 1
ATPAF2Q8N5M1 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
ATPAF2Q8N5M1 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.28■■□□□ 1
ATPAF2Q8N5M1 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC21.28■■□□□ 1
ATPAF2Q8N5M1 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ATPAF2Q8N5M1 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.28■■□□□ 1
ATPAF2Q8N5M1 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.28■■□□□ 1
ATPAF2Q8N5M1 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC21.27■■□□□ 1
ATPAF2Q8N5M1 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ATPAF2Q8N5M1 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC21.27■■□□□ 1
ATPAF2Q8N5M1 SPI1-203ENST00000533030 661 ntTSL 2 BASIC21.27■■□□□ 1
ATPAF2Q8N5M1 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.27■■□□□ 1
ATPAF2Q8N5M1 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.27■■□□□ 1
ATPAF2Q8N5M1 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC21.27■■□□□ 1
ATPAF2Q8N5M1 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ATPAF2Q8N5M1 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC21.27■■□□□ 1
ATPAF2Q8N5M1 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.27■■□□□ 1
ATPAF2Q8N5M1 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ATPAF2Q8N5M1 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
ATPAF2Q8N5M1 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
ATPAF2Q8N5M1 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC21.27■■□□□ 1
ATPAF2Q8N5M1 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
ATPAF2Q8N5M1 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.26■□□□□ 0.99
ATPAF2Q8N5M1 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
ATPAF2Q8N5M1 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ATPAF2Q8N5M1 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
ATPAF2Q8N5M1 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
ATPAF2Q8N5M1 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
ATPAF2Q8N5M1 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
ATPAF2Q8N5M1 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
ATPAF2Q8N5M1 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC21.26■□□□□ 0.99
ATPAF2Q8N5M1 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
ATPAF2Q8N5M1 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
ATPAF2Q8N5M1 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.26■□□□□ 0.99
ATPAF2Q8N5M1 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
ATPAF2Q8N5M1 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
ATPAF2Q8N5M1 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
ATPAF2Q8N5M1 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC21.26■□□□□ 0.99
ATPAF2Q8N5M1 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ATPAF2Q8N5M1 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ATPAF2Q8N5M1 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
ATPAF2Q8N5M1 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
ATPAF2Q8N5M1 PARL-206ENST00000435888 1098 ntTSL 5 BASIC21.25■□□□□ 0.99
ATPAF2Q8N5M1 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms