Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
TTC39CQ8N584 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC22.14■■□□□ 1.13
TTC39CQ8N584 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC22.14■■□□□ 1.13
TTC39CQ8N584 AC091799.1-201ENST00000422823 811 ntBASIC22.14■■□□□ 1.13
TTC39CQ8N584 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC22.14■■□□□ 1.13
TTC39CQ8N584 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC22.14■■□□□ 1.13
TTC39CQ8N584 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
TTC39CQ8N584 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
TTC39CQ8N584 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC22.14■■□□□ 1.13
TTC39CQ8N584 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC22.14■■□□□ 1.13
TTC39CQ8N584 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC22.14■■□□□ 1.13
TTC39CQ8N584 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
TTC39CQ8N584 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
TTC39CQ8N584 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
TTC39CQ8N584 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
TTC39CQ8N584 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC22.14■■□□□ 1.13
TTC39CQ8N584 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
TTC39CQ8N584 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
TTC39CQ8N584 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC22.13■■□□□ 1.13
TTC39CQ8N584 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC22.13■■□□□ 1.13
TTC39CQ8N584 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
TTC39CQ8N584 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
TTC39CQ8N584 PTPA-214ENST00000423100 988 ntTSL 2 BASIC22.13■■□□□ 1.13
TTC39CQ8N584 CDV3P1-201ENST00000471403 739 ntBASIC22.13■■□□□ 1.13
TTC39CQ8N584 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC22.13■■□□□ 1.13
TTC39CQ8N584 AL591742.1-201ENST00000604433 565 ntBASIC22.13■■□□□ 1.13
TTC39CQ8N584 AC092666.2-201ENST00000613287 246 ntBASIC22.13■■□□□ 1.13
TTC39CQ8N584 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
TTC39CQ8N584 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC22.12■■□□□ 1.13
TTC39CQ8N584 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC22.12■■□□□ 1.13
TTC39CQ8N584 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
TTC39CQ8N584 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
TTC39CQ8N584 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
TTC39CQ8N584 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
TTC39CQ8N584 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
TTC39CQ8N584 SAPCD2P1-201ENST00000395413 1184 ntBASIC22.12■■□□□ 1.13
TTC39CQ8N584 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
TTC39CQ8N584 AC004911.1-201ENST00000416316 871 ntBASIC22.12■■□□□ 1.13
TTC39CQ8N584 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC22.12■■□□□ 1.13
TTC39CQ8N584 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC22.12■■□□□ 1.13
TTC39CQ8N584 VPS53-216ENST00000574029 585 ntTSL 4 BASIC22.12■■□□□ 1.13
TTC39CQ8N584 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC22.12■■□□□ 1.13
TTC39CQ8N584 AC080038.1-201ENST00000611274 1154 ntBASIC22.12■■□□□ 1.13
TTC39CQ8N584 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC22.12■■□□□ 1.13
TTC39CQ8N584 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
TTC39CQ8N584 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
TTC39CQ8N584 AC116050.2-201ENST00000612102 1779 ntBASIC22.12■■□□□ 1.13
TTC39CQ8N584 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
TTC39CQ8N584 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
TTC39CQ8N584 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC22.11■■□□□ 1.13
TTC39CQ8N584 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC22.11■■□□□ 1.13
TTC39CQ8N584 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
TTC39CQ8N584 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC22.11■■□□□ 1.13
TTC39CQ8N584 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC22.11■■□□□ 1.13
TTC39CQ8N584 PARP1-210ENST00000629232 477 ntTSL 5 BASIC22.11■■□□□ 1.13
TTC39CQ8N584 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
TTC39CQ8N584 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
TTC39CQ8N584 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC22.11■■□□□ 1.13
TTC39CQ8N584 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
TTC39CQ8N584 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
TTC39CQ8N584 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC22.1■■□□□ 1.13
TTC39CQ8N584 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC22.1■■□□□ 1.13
TTC39CQ8N584 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC22.1■■□□□ 1.13
TTC39CQ8N584 BMP1-204ENST00000397814 836 ntTSL 4 BASIC22.1■■□□□ 1.13
TTC39CQ8N584 AC007322.1-201ENST00000426983 750 ntBASIC22.1■■□□□ 1.13
TTC39CQ8N584 PBX1-209ENST00000485769 834 ntTSL 2 BASIC22.1■■□□□ 1.13
TTC39CQ8N584 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC22.1■■□□□ 1.13
TTC39CQ8N584 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC22.1■■□□□ 1.13
TTC39CQ8N584 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
TTC39CQ8N584 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC22.1■■□□□ 1.13
TTC39CQ8N584 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
TTC39CQ8N584 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC22.1■■□□□ 1.13
TTC39CQ8N584 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
TTC39CQ8N584 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
TTC39CQ8N584 AC011484.1-201ENST00000377652 1995 ntBASIC22.09■■□□□ 1.13
TTC39CQ8N584 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
TTC39CQ8N584 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
TTC39CQ8N584 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
TTC39CQ8N584 UQCRFS1P1-201ENST00000435169 820 ntBASIC22.09■■□□□ 1.13
TTC39CQ8N584 CNN2P6-201ENST00000439038 900 ntBASIC22.09■■□□□ 1.13
TTC39CQ8N584 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
TTC39CQ8N584 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
TTC39CQ8N584 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC22.09■■□□□ 1.13
TTC39CQ8N584 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
TTC39CQ8N584 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
TTC39CQ8N584 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
TTC39CQ8N584 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
TTC39CQ8N584 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
TTC39CQ8N584 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
TTC39CQ8N584 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
TTC39CQ8N584 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC22.08■■□□□ 1.13
TTC39CQ8N584 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
TTC39CQ8N584 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
TTC39CQ8N584 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.13
TTC39CQ8N584 AC007322.3-201ENST00000426526 701 ntBASIC22.08■■□□□ 1.13
TTC39CQ8N584 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC22.08■■□□□ 1.13
TTC39CQ8N584 DLX3-202ENST00000512495 834 ntTSL 2 BASIC22.08■■□□□ 1.13
TTC39CQ8N584 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC22.08■■□□□ 1.13
TTC39CQ8N584 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.13
TTC39CQ8N584 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms