Protein–RNA interactions for Protein: Q8N2R8

FAM43A, Protein FAM43A, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM43AQ8N2R8 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
FAM43AQ8N2R8 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
FAM43AQ8N2R8 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC25.33■■□□□ 1.65
FAM43AQ8N2R8 SLC29A4P1-201ENST00000398760 971 ntBASIC25.33■■□□□ 1.65
FAM43AQ8N2R8 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
FAM43AQ8N2R8 PFKL-212ENST00000628044 129 ntTSL 3 BASIC25.33■■□□□ 1.65
FAM43AQ8N2R8 MCC-208ENST00000514701 2855 ntTSL 2 BASIC25.33■■□□□ 1.64
FAM43AQ8N2R8 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC25.33■■□□□ 1.64
FAM43AQ8N2R8 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC25.33■■□□□ 1.64
FAM43AQ8N2R8 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
FAM43AQ8N2R8 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
FAM43AQ8N2R8 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC25.32■■□□□ 1.64
FAM43AQ8N2R8 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
FAM43AQ8N2R8 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC25.32■■□□□ 1.64
FAM43AQ8N2R8 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC25.32■■□□□ 1.64
FAM43AQ8N2R8 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
FAM43AQ8N2R8 RGMA-211ENST00000557420 989 ntTSL 3 BASIC25.32■■□□□ 1.64
FAM43AQ8N2R8 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
FAM43AQ8N2R8 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
FAM43AQ8N2R8 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC25.32■■□□□ 1.64
FAM43AQ8N2R8 AC005224.4-201ENST00000583262 1652 ntBASIC25.32■■□□□ 1.64
FAM43AQ8N2R8 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
FAM43AQ8N2R8 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC25.31■■□□□ 1.64
FAM43AQ8N2R8 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
FAM43AQ8N2R8 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
FAM43AQ8N2R8 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC25.31■■□□□ 1.64
FAM43AQ8N2R8 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
FAM43AQ8N2R8 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
FAM43AQ8N2R8 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
FAM43AQ8N2R8 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC25.31■■□□□ 1.64
FAM43AQ8N2R8 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
FAM43AQ8N2R8 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC25.3■■□□□ 1.64
FAM43AQ8N2R8 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
FAM43AQ8N2R8 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
FAM43AQ8N2R8 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
FAM43AQ8N2R8 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
FAM43AQ8N2R8 FAM201B-201ENST00000458407 597 ntBASIC25.3■■□□□ 1.64
FAM43AQ8N2R8 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
FAM43AQ8N2R8 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
FAM43AQ8N2R8 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
FAM43AQ8N2R8 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC25.3■■□□□ 1.64
FAM43AQ8N2R8 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC25.3■■□□□ 1.64
FAM43AQ8N2R8 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC25.29■■□□□ 1.64
FAM43AQ8N2R8 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC25.29■■□□□ 1.64
FAM43AQ8N2R8 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
FAM43AQ8N2R8 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC25.29■■□□□ 1.64
FAM43AQ8N2R8 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
FAM43AQ8N2R8 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC25.29■■□□□ 1.64
FAM43AQ8N2R8 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC25.29■■□□□ 1.64
FAM43AQ8N2R8 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC25.29■■□□□ 1.64
FAM43AQ8N2R8 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
FAM43AQ8N2R8 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC25.29■■□□□ 1.64
FAM43AQ8N2R8 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
FAM43AQ8N2R8 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
FAM43AQ8N2R8 AC098934.4-201ENST00000564127 592 ntBASIC25.29■■□□□ 1.64
FAM43AQ8N2R8 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC25.29■■□□□ 1.64
FAM43AQ8N2R8 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC25.29■■□□□ 1.64
FAM43AQ8N2R8 USP45-205ENST00000472914 1617 ntTSL 5 BASIC25.29■■□□□ 1.64
FAM43AQ8N2R8 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
FAM43AQ8N2R8 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
FAM43AQ8N2R8 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
FAM43AQ8N2R8 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
FAM43AQ8N2R8 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
FAM43AQ8N2R8 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
FAM43AQ8N2R8 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC25.28■■□□□ 1.64
FAM43AQ8N2R8 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC25.28■■□□□ 1.64
FAM43AQ8N2R8 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
FAM43AQ8N2R8 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC25.28■■□□□ 1.64
FAM43AQ8N2R8 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
FAM43AQ8N2R8 AC093827.2-201ENST00000512654 315 ntBASIC25.28■■□□□ 1.64
FAM43AQ8N2R8 BRI3-207ENST00000539286 699 ntTSL 2 BASIC25.28■■□□□ 1.64
FAM43AQ8N2R8 DET1-205ENST00000558413 583 ntTSL 4 BASIC25.28■■□□□ 1.64
FAM43AQ8N2R8 AC008687.6-201ENST00000596318 630 ntBASIC25.28■■□□□ 1.64
FAM43AQ8N2R8 MYCNOS-205ENST00000641950 531 ntBASIC25.28■■□□□ 1.64
FAM43AQ8N2R8 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
FAM43AQ8N2R8 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC25.28■■□□□ 1.64
FAM43AQ8N2R8 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC25.28■■□□□ 1.64
FAM43AQ8N2R8 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
FAM43AQ8N2R8 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
FAM43AQ8N2R8 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC25.28■■□□□ 1.64
FAM43AQ8N2R8 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC25.27■■□□□ 1.64
FAM43AQ8N2R8 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC25.27■■□□□ 1.64
FAM43AQ8N2R8 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
FAM43AQ8N2R8 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC25.27■■□□□ 1.64
FAM43AQ8N2R8 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC25.27■■□□□ 1.64
FAM43AQ8N2R8 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC25.27■■□□□ 1.64
FAM43AQ8N2R8 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC25.27■■□□□ 1.64
FAM43AQ8N2R8 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC25.27■■□□□ 1.64
FAM43AQ8N2R8 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC25.27■■□□□ 1.64
FAM43AQ8N2R8 TBCB-214ENST00000629269 413 ntTSL 5 BASIC25.27■■□□□ 1.64
FAM43AQ8N2R8 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC25.27■■□□□ 1.64
FAM43AQ8N2R8 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC25.27■■□□□ 1.64
FAM43AQ8N2R8 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
FAM43AQ8N2R8 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
FAM43AQ8N2R8 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
FAM43AQ8N2R8 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC25.27■■□□□ 1.64
FAM43AQ8N2R8 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC25.27■■□□□ 1.64
FAM43AQ8N2R8 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
FAM43AQ8N2R8 GCA-201ENST00000233612 1694 ntTSL 2 BASIC25.26■■□□□ 1.63
FAM43AQ8N2R8 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC25.26■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms