Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
COL27A1Q8IZC6 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
COL27A1Q8IZC6 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL27A1Q8IZC6 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL27A1Q8IZC6 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL27A1Q8IZC6 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.8■□□□□ 0.76
COL27A1Q8IZC6 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL27A1Q8IZC6 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
COL27A1Q8IZC6 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL27A1Q8IZC6 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL27A1Q8IZC6 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
COL27A1Q8IZC6 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.79■□□□□ 0.76
COL27A1Q8IZC6 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.79■□□□□ 0.76
COL27A1Q8IZC6 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.79■□□□□ 0.76
COL27A1Q8IZC6 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
COL27A1Q8IZC6 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.79■□□□□ 0.76
COL27A1Q8IZC6 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC19.79■□□□□ 0.76
COL27A1Q8IZC6 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
COL27A1Q8IZC6 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL27A1Q8IZC6 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
COL27A1Q8IZC6 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.79■□□□□ 0.76
COL27A1Q8IZC6 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.78■□□□□ 0.76
COL27A1Q8IZC6 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL27A1Q8IZC6 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
COL27A1Q8IZC6 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
COL27A1Q8IZC6 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL27A1Q8IZC6 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
COL27A1Q8IZC6 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
COL27A1Q8IZC6 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
COL27A1Q8IZC6 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL27A1Q8IZC6 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
COL27A1Q8IZC6 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.78■□□□□ 0.76
COL27A1Q8IZC6 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.78■□□□□ 0.76
COL27A1Q8IZC6 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
COL27A1Q8IZC6 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC19.78■□□□□ 0.76
COL27A1Q8IZC6 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL27A1Q8IZC6 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.78■□□□□ 0.76
COL27A1Q8IZC6 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC19.78■□□□□ 0.76
COL27A1Q8IZC6 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.78■□□□□ 0.76
COL27A1Q8IZC6 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
COL27A1Q8IZC6 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
COL27A1Q8IZC6 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
COL27A1Q8IZC6 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
COL27A1Q8IZC6 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
COL27A1Q8IZC6 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.77■□□□□ 0.76
COL27A1Q8IZC6 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.77■□□□□ 0.76
COL27A1Q8IZC6 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.77■□□□□ 0.76
COL27A1Q8IZC6 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.77■□□□□ 0.76
COL27A1Q8IZC6 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
COL27A1Q8IZC6 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
COL27A1Q8IZC6 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
COL27A1Q8IZC6 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
COL27A1Q8IZC6 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
COL27A1Q8IZC6 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
COL27A1Q8IZC6 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
COL27A1Q8IZC6 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.77■□□□□ 0.76
COL27A1Q8IZC6 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.77■□□□□ 0.76
COL27A1Q8IZC6 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.77■□□□□ 0.76
COL27A1Q8IZC6 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.77■□□□□ 0.76
COL27A1Q8IZC6 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
COL27A1Q8IZC6 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
COL27A1Q8IZC6 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
COL27A1Q8IZC6 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.77■□□□□ 0.76
COL27A1Q8IZC6 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL27A1Q8IZC6 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.76■□□□□ 0.75
COL27A1Q8IZC6 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
COL27A1Q8IZC6 KRT18P68-201ENST00000392293 1000 ntBASIC19.76■□□□□ 0.75
COL27A1Q8IZC6 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.76■□□□□ 0.75
COL27A1Q8IZC6 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.76■□□□□ 0.75
COL27A1Q8IZC6 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.76■□□□□ 0.75
COL27A1Q8IZC6 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.76■□□□□ 0.75
COL27A1Q8IZC6 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.76■□□□□ 0.75
COL27A1Q8IZC6 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.76■□□□□ 0.75
COL27A1Q8IZC6 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL27A1Q8IZC6 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL27A1Q8IZC6 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL27A1Q8IZC6 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
COL27A1Q8IZC6 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
COL27A1Q8IZC6 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.75■□□□□ 0.75
COL27A1Q8IZC6 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL27A1Q8IZC6 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.75■□□□□ 0.75
COL27A1Q8IZC6 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.75■□□□□ 0.75
COL27A1Q8IZC6 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19.75■□□□□ 0.75
COL27A1Q8IZC6 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.75■□□□□ 0.75
COL27A1Q8IZC6 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.75■□□□□ 0.75
COL27A1Q8IZC6 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL27A1Q8IZC6 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.75■□□□□ 0.75
COL27A1Q8IZC6 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL27A1Q8IZC6 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.75■□□□□ 0.75
COL27A1Q8IZC6 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL27A1Q8IZC6 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
COL27A1Q8IZC6 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL27A1Q8IZC6 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL27A1Q8IZC6 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL27A1Q8IZC6 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
COL27A1Q8IZC6 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.75■□□□□ 0.75
COL27A1Q8IZC6 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.75■□□□□ 0.75
COL27A1Q8IZC6 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
COL27A1Q8IZC6 AC073912.3-201ENST00000624414 853 ntBASIC19.75■□□□□ 0.75
COL27A1Q8IZC6 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms