Protein–RNA interactions for Protein: Q8IY21

DDX60, Probable ATP-dependent RNA helicase DDX60, humanhuman

Known RBP Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60Q8IY21 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
DDX60Q8IY21 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC25.89■■□□□ 1.74
DDX60Q8IY21 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC25.89■■□□□ 1.74
DDX60Q8IY21 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC25.89■■□□□ 1.74
DDX60Q8IY21 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC25.89■■□□□ 1.74
DDX60Q8IY21 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC25.89■■□□□ 1.73
DDX60Q8IY21 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC25.89■■□□□ 1.73
DDX60Q8IY21 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
DDX60Q8IY21 AC233723.2-201ENST00000623798 2106 ntBASIC25.89■■□□□ 1.73
DDX60Q8IY21 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
DDX60Q8IY21 AC087633.2-202ENST00000565166 1439 ntBASIC25.88■■□□□ 1.73
DDX60Q8IY21 MMD2-204ENST00000612910 778 ntTSL 5 BASIC25.88■■□□□ 1.73
DDX60Q8IY21 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
DDX60Q8IY21 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC25.88■■□□□ 1.73
DDX60Q8IY21 TERT-206ENST00000508104 2486 ntTSL 5 BASIC25.88■■□□□ 1.73
DDX60Q8IY21 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC25.88■■□□□ 1.73
DDX60Q8IY21 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC25.88■■□□□ 1.73
DDX60Q8IY21 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
DDX60Q8IY21 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC25.88■■□□□ 1.73
DDX60Q8IY21 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC25.87■■□□□ 1.73
DDX60Q8IY21 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
DDX60Q8IY21 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
DDX60Q8IY21 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
DDX60Q8IY21 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
DDX60Q8IY21 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
DDX60Q8IY21 CYP21A1P-202ENST00000354927 1481 ntBASIC25.87■■□□□ 1.73
DDX60Q8IY21 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
DDX60Q8IY21 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC25.87■■□□□ 1.73
DDX60Q8IY21 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
DDX60Q8IY21 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
DDX60Q8IY21 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
DDX60Q8IY21 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
DDX60Q8IY21 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC25.87■■□□□ 1.73
DDX60Q8IY21 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
DDX60Q8IY21 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
DDX60Q8IY21 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC25.86■■□□□ 1.73
DDX60Q8IY21 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC25.86■■□□□ 1.73
DDX60Q8IY21 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
DDX60Q8IY21 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
DDX60Q8IY21 AC142381.4-202ENST00000563973 229 ntBASIC25.86■■□□□ 1.73
DDX60Q8IY21 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC25.86■■□□□ 1.73
DDX60Q8IY21 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC25.86■■□□□ 1.73
DDX60Q8IY21 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
DDX60Q8IY21 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
DDX60Q8IY21 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
DDX60Q8IY21 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC25.86■■□□□ 1.73
DDX60Q8IY21 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
DDX60Q8IY21 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
DDX60Q8IY21 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC25.85■■□□□ 1.73
DDX60Q8IY21 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC25.85■■□□□ 1.73
DDX60Q8IY21 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC25.85■■□□□ 1.73
DDX60Q8IY21 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
DDX60Q8IY21 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC25.85■■□□□ 1.73
DDX60Q8IY21 GCK-205ENST00000437084 1385 ntTSL 5 BASIC25.85■■□□□ 1.73
DDX60Q8IY21 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC25.85■■□□□ 1.73
DDX60Q8IY21 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
DDX60Q8IY21 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC25.85■■□□□ 1.73
DDX60Q8IY21 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC25.85■■□□□ 1.73
DDX60Q8IY21 GUSBP5-202ENST00000510805 1989 ntBASIC25.85■■□□□ 1.73
DDX60Q8IY21 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
DDX60Q8IY21 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC25.85■■□□□ 1.73
DDX60Q8IY21 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC25.85■■□□□ 1.73
DDX60Q8IY21 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
DDX60Q8IY21 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
DDX60Q8IY21 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
DDX60Q8IY21 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC25.84■■□□□ 1.73
DDX60Q8IY21 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC25.84■■□□□ 1.73
DDX60Q8IY21 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
DDX60Q8IY21 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC25.84■■□□□ 1.73
DDX60Q8IY21 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC25.84■■□□□ 1.73
DDX60Q8IY21 AC128676.1-201ENST00000454392 318 ntBASIC25.84■■□□□ 1.73
DDX60Q8IY21 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
DDX60Q8IY21 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
DDX60Q8IY21 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC25.84■■□□□ 1.73
DDX60Q8IY21 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
DDX60Q8IY21 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
DDX60Q8IY21 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC25.83■■□□□ 1.73
DDX60Q8IY21 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC25.83■■□□□ 1.73
DDX60Q8IY21 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC25.83■■□□□ 1.73
DDX60Q8IY21 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC25.83■■□□□ 1.73
DDX60Q8IY21 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC25.83■■□□□ 1.73
DDX60Q8IY21 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC25.83■■□□□ 1.73
DDX60Q8IY21 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
DDX60Q8IY21 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC25.83■■□□□ 1.73
DDX60Q8IY21 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
DDX60Q8IY21 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC25.83■■□□□ 1.73
DDX60Q8IY21 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
DDX60Q8IY21 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC25.83■■□□□ 1.73
DDX60Q8IY21 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC25.83■■□□□ 1.73
DDX60Q8IY21 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC25.83■■□□□ 1.72
DDX60Q8IY21 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC25.83■■□□□ 1.72
DDX60Q8IY21 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
DDX60Q8IY21 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
DDX60Q8IY21 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
DDX60Q8IY21 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
DDX60Q8IY21 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
DDX60Q8IY21 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC25.82■■□□□ 1.72
DDX60Q8IY21 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
DDX60Q8IY21 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC25.82■■□□□ 1.72
DDX60Q8IY21 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC25.82■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms