Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
C9orf40Q8IXQ3 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.25■□□□□ 0.67
C9orf40Q8IXQ3 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.25■□□□□ 0.67
C9orf40Q8IXQ3 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
C9orf40Q8IXQ3 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.25■□□□□ 0.67
C9orf40Q8IXQ3 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
C9orf40Q8IXQ3 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
C9orf40Q8IXQ3 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.25■□□□□ 0.67
C9orf40Q8IXQ3 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
C9orf40Q8IXQ3 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.25■□□□□ 0.67
C9orf40Q8IXQ3 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
C9orf40Q8IXQ3 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
C9orf40Q8IXQ3 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
C9orf40Q8IXQ3 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
C9orf40Q8IXQ3 AF106564.1-201ENST00000607058 2553 ntBASIC19.24■□□□□ 0.67
C9orf40Q8IXQ3 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
C9orf40Q8IXQ3 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.24■□□□□ 0.67
C9orf40Q8IXQ3 CYP2T1P-201ENST00000432607 1285 ntBASIC19.24■□□□□ 0.67
C9orf40Q8IXQ3 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
C9orf40Q8IXQ3 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.24■□□□□ 0.67
C9orf40Q8IXQ3 AC006970.2-201ENST00000450065 779 ntBASIC19.24■□□□□ 0.67
C9orf40Q8IXQ3 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.24■□□□□ 0.67
C9orf40Q8IXQ3 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC19.24■□□□□ 0.67
C9orf40Q8IXQ3 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
C9orf40Q8IXQ3 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.24■□□□□ 0.67
C9orf40Q8IXQ3 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.24■□□□□ 0.67
C9orf40Q8IXQ3 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
C9orf40Q8IXQ3 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
C9orf40Q8IXQ3 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
C9orf40Q8IXQ3 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
C9orf40Q8IXQ3 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
C9orf40Q8IXQ3 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
C9orf40Q8IXQ3 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
C9orf40Q8IXQ3 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
C9orf40Q8IXQ3 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
C9orf40Q8IXQ3 PPP1R14BP3-201ENST00000509033 445 ntBASIC19.23■□□□□ 0.67
C9orf40Q8IXQ3 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
C9orf40Q8IXQ3 AL591742.1-201ENST00000604433 565 ntBASIC19.23■□□□□ 0.67
C9orf40Q8IXQ3 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.23■□□□□ 0.67
C9orf40Q8IXQ3 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.23■□□□□ 0.67
C9orf40Q8IXQ3 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.23■□□□□ 0.67
C9orf40Q8IXQ3 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
C9orf40Q8IXQ3 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
C9orf40Q8IXQ3 AL049796.1-201ENST00000565336 1766 ntBASIC19.22■□□□□ 0.67
C9orf40Q8IXQ3 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
C9orf40Q8IXQ3 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
C9orf40Q8IXQ3 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
C9orf40Q8IXQ3 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
C9orf40Q8IXQ3 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.22■□□□□ 0.67
C9orf40Q8IXQ3 TK2-208ENST00000545043 1120 ntTSL 2 BASIC19.22■□□□□ 0.67
C9orf40Q8IXQ3 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
C9orf40Q8IXQ3 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
C9orf40Q8IXQ3 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
C9orf40Q8IXQ3 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
C9orf40Q8IXQ3 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
C9orf40Q8IXQ3 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
C9orf40Q8IXQ3 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.22■□□□□ 0.67
C9orf40Q8IXQ3 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.21■□□□□ 0.67
C9orf40Q8IXQ3 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.21■□□□□ 0.67
C9orf40Q8IXQ3 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.21■□□□□ 0.67
C9orf40Q8IXQ3 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
C9orf40Q8IXQ3 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.21■□□□□ 0.67
C9orf40Q8IXQ3 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
C9orf40Q8IXQ3 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
C9orf40Q8IXQ3 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
C9orf40Q8IXQ3 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
C9orf40Q8IXQ3 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19.21■□□□□ 0.67
C9orf40Q8IXQ3 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
C9orf40Q8IXQ3 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
C9orf40Q8IXQ3 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
C9orf40Q8IXQ3 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
C9orf40Q8IXQ3 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
C9orf40Q8IXQ3 AL162412.1-201ENST00000567129 965 ntBASIC19.21■□□□□ 0.67
C9orf40Q8IXQ3 AC007375.3-201ENST00000600936 2314 ntBASIC19.21■□□□□ 0.67
C9orf40Q8IXQ3 AC016405.3-201ENST00000607710 860 ntBASIC19.21■□□□□ 0.67
C9orf40Q8IXQ3 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
C9orf40Q8IXQ3 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
C9orf40Q8IXQ3 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
C9orf40Q8IXQ3 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
C9orf40Q8IXQ3 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
C9orf40Q8IXQ3 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
C9orf40Q8IXQ3 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
C9orf40Q8IXQ3 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
C9orf40Q8IXQ3 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.2■□□□□ 0.66
C9orf40Q8IXQ3 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.2■□□□□ 0.66
C9orf40Q8IXQ3 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.2■□□□□ 0.66
C9orf40Q8IXQ3 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
C9orf40Q8IXQ3 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
C9orf40Q8IXQ3 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
C9orf40Q8IXQ3 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
C9orf40Q8IXQ3 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.2■□□□□ 0.66
C9orf40Q8IXQ3 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC19.2■□□□□ 0.66
C9orf40Q8IXQ3 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.2■□□□□ 0.66
C9orf40Q8IXQ3 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
C9orf40Q8IXQ3 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.2■□□□□ 0.66
C9orf40Q8IXQ3 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.2■□□□□ 0.66
C9orf40Q8IXQ3 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19.2■□□□□ 0.66
C9orf40Q8IXQ3 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.2■□□□□ 0.66
C9orf40Q8IXQ3 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.2■□□□□ 0.66
C9orf40Q8IXQ3 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms