Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CRLF3Q8IUI8 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.7■□□□□ 0.9
CRLF3Q8IUI8 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CRLF3Q8IUI8 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
CRLF3Q8IUI8 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.7■□□□□ 0.9
CRLF3Q8IUI8 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
CRLF3Q8IUI8 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CRLF3Q8IUI8 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CRLF3Q8IUI8 RASA4CP-201ENST00000424092 1398 ntBASIC20.7■□□□□ 0.9
CRLF3Q8IUI8 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
CRLF3Q8IUI8 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CRLF3Q8IUI8 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CRLF3Q8IUI8 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CRLF3Q8IUI8 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CRLF3Q8IUI8 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CRLF3Q8IUI8 OR2I1P-207ENST00000453522 948 ntBASIC20.69■□□□□ 0.9
CRLF3Q8IUI8 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.69■□□□□ 0.9
CRLF3Q8IUI8 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.69■□□□□ 0.9
CRLF3Q8IUI8 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CRLF3Q8IUI8 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CRLF3Q8IUI8 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.69■□□□□ 0.9
CRLF3Q8IUI8 AC007952.6-201ENST00000573168 2673 ntBASIC20.69■□□□□ 0.9
CRLF3Q8IUI8 AC003957.1-201ENST00000625108 2673 ntBASIC20.69■□□□□ 0.9
CRLF3Q8IUI8 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CRLF3Q8IUI8 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CRLF3Q8IUI8 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
CRLF3Q8IUI8 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.68■□□□□ 0.9
CRLF3Q8IUI8 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CRLF3Q8IUI8 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CRLF3Q8IUI8 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
CRLF3Q8IUI8 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CRLF3Q8IUI8 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.68■□□□□ 0.9
CRLF3Q8IUI8 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
CRLF3Q8IUI8 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.68■□□□□ 0.9
CRLF3Q8IUI8 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CRLF3Q8IUI8 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CRLF3Q8IUI8 AP004607.7-201ENST00000527152 1677 ntBASIC20.68■□□□□ 0.9
CRLF3Q8IUI8 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.68■□□□□ 0.9
CRLF3Q8IUI8 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CRLF3Q8IUI8 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CRLF3Q8IUI8 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CRLF3Q8IUI8 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.68■□□□□ 0.9
CRLF3Q8IUI8 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CRLF3Q8IUI8 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.68■□□□□ 0.9
CRLF3Q8IUI8 AC099791.1-201ENST00000416440 715 ntBASIC20.68■□□□□ 0.9
CRLF3Q8IUI8 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CRLF3Q8IUI8 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.68■□□□□ 0.9
CRLF3Q8IUI8 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.68■□□□□ 0.9
CRLF3Q8IUI8 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CRLF3Q8IUI8 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CRLF3Q8IUI8 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.68■□□□□ 0.9
CRLF3Q8IUI8 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CRLF3Q8IUI8 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CRLF3Q8IUI8 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CRLF3Q8IUI8 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CRLF3Q8IUI8 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CRLF3Q8IUI8 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CRLF3Q8IUI8 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CRLF3Q8IUI8 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CRLF3Q8IUI8 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.67■□□□□ 0.9
CRLF3Q8IUI8 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.67■□□□□ 0.9
CRLF3Q8IUI8 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CRLF3Q8IUI8 PLK5-205ENST00000642079 1969 ntBASIC20.67■□□□□ 0.9
CRLF3Q8IUI8 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CRLF3Q8IUI8 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CRLF3Q8IUI8 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CRLF3Q8IUI8 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CRLF3Q8IUI8 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CRLF3Q8IUI8 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
CRLF3Q8IUI8 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CRLF3Q8IUI8 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CRLF3Q8IUI8 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CRLF3Q8IUI8 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CRLF3Q8IUI8 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
CRLF3Q8IUI8 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CRLF3Q8IUI8 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CRLF3Q8IUI8 BX842568.3-201ENST00000418104 571 ntBASIC20.66■□□□□ 0.9
CRLF3Q8IUI8 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.66■□□□□ 0.9
CRLF3Q8IUI8 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.66■□□□□ 0.9
CRLF3Q8IUI8 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
CRLF3Q8IUI8 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CRLF3Q8IUI8 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
CRLF3Q8IUI8 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CRLF3Q8IUI8 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
CRLF3Q8IUI8 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CRLF3Q8IUI8 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CRLF3Q8IUI8 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CRLF3Q8IUI8 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CRLF3Q8IUI8 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CRLF3Q8IUI8 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CRLF3Q8IUI8 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CRLF3Q8IUI8 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CRLF3Q8IUI8 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.65■□□□□ 0.9
CRLF3Q8IUI8 AC233992.3-201ENST00000607491 485 ntBASIC20.65■□□□□ 0.9
CRLF3Q8IUI8 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CRLF3Q8IUI8 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CRLF3Q8IUI8 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.65■□□□□ 0.9
CRLF3Q8IUI8 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CRLF3Q8IUI8 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.65■□□□□ 0.9
CRLF3Q8IUI8 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms