Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
COL23A1Q86Y22 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC26.4■■□□□ 1.82
COL23A1Q86Y22 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
COL23A1Q86Y22 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
COL23A1Q86Y22 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
COL23A1Q86Y22 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC26.4■■□□□ 1.82
COL23A1Q86Y22 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
COL23A1Q86Y22 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC26.4■■□□□ 1.82
COL23A1Q86Y22 C2orf69P4-201ENST00000565394 541 ntBASIC26.4■■□□□ 1.82
COL23A1Q86Y22 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC26.4■■□□□ 1.82
COL23A1Q86Y22 AL353708.3-201ENST00000610272 989 ntBASIC26.4■■□□□ 1.82
COL23A1Q86Y22 AC110285.5-201ENST00000611501 352 ntBASIC26.4■■□□□ 1.82
COL23A1Q86Y22 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC26.4■■□□□ 1.82
COL23A1Q86Y22 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC26.4■■□□□ 1.82
COL23A1Q86Y22 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC26.4■■□□□ 1.82
COL23A1Q86Y22 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC26.4■■□□□ 1.82
COL23A1Q86Y22 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC26.4■■□□□ 1.82
COL23A1Q86Y22 AL135905.2-201ENST00000584934 1404 ntBASIC26.39■■□□□ 1.82
COL23A1Q86Y22 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
COL23A1Q86Y22 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
COL23A1Q86Y22 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC26.39■■□□□ 1.82
COL23A1Q86Y22 ARMC10P1-201ENST00000313754 855 ntBASIC26.39■■□□□ 1.82
COL23A1Q86Y22 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC26.39■■□□□ 1.82
COL23A1Q86Y22 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
COL23A1Q86Y22 AC239809.2-201ENST00000415381 517 ntBASIC26.39■■□□□ 1.82
COL23A1Q86Y22 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC26.39■■□□□ 1.82
COL23A1Q86Y22 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC26.39■■□□□ 1.82
COL23A1Q86Y22 PENK-204ENST00000518770 863 ntTSL 2 BASIC26.39■■□□□ 1.82
COL23A1Q86Y22 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
COL23A1Q86Y22 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC26.39■■□□□ 1.82
COL23A1Q86Y22 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC26.39■■□□□ 1.82
COL23A1Q86Y22 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC26.39■■□□□ 1.82
COL23A1Q86Y22 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC26.39■■□□□ 1.82
COL23A1Q86Y22 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
COL23A1Q86Y22 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
COL23A1Q86Y22 CYP21A1P-202ENST00000354927 1481 ntBASIC26.38■■□□□ 1.81
COL23A1Q86Y22 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
COL23A1Q86Y22 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
COL23A1Q86Y22 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC26.38■■□□□ 1.81
COL23A1Q86Y22 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC26.38■■□□□ 1.81
COL23A1Q86Y22 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
COL23A1Q86Y22 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC26.38■■□□□ 1.81
COL23A1Q86Y22 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
COL23A1Q86Y22 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC26.38■■□□□ 1.81
COL23A1Q86Y22 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
COL23A1Q86Y22 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
COL23A1Q86Y22 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
COL23A1Q86Y22 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC26.38■■□□□ 1.81
COL23A1Q86Y22 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
COL23A1Q86Y22 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
COL23A1Q86Y22 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC26.37■■□□□ 1.81
COL23A1Q86Y22 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC26.37■■□□□ 1.81
COL23A1Q86Y22 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC26.37■■□□□ 1.81
COL23A1Q86Y22 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
COL23A1Q86Y22 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
COL23A1Q86Y22 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
COL23A1Q86Y22 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
COL23A1Q86Y22 PRKY-204ENST00000533551 1019 ntBASIC26.37■■□□□ 1.81
COL23A1Q86Y22 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC26.37■■□□□ 1.81
COL23A1Q86Y22 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC26.37■■□□□ 1.81
COL23A1Q86Y22 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC26.37■■□□□ 1.81
COL23A1Q86Y22 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC26.37■■□□□ 1.81
COL23A1Q86Y22 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC26.37■■□□□ 1.81
COL23A1Q86Y22 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
COL23A1Q86Y22 AC139530.1-201ENST00000575312 1977 ntBASIC26.37■■□□□ 1.81
COL23A1Q86Y22 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
COL23A1Q86Y22 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
COL23A1Q86Y22 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
COL23A1Q86Y22 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
COL23A1Q86Y22 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
COL23A1Q86Y22 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC26.36■■□□□ 1.81
COL23A1Q86Y22 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
COL23A1Q86Y22 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC26.36■■□□□ 1.81
COL23A1Q86Y22 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC26.36■■□□□ 1.81
COL23A1Q86Y22 AC105020.6-201ENST00000621523 1217 ntBASIC26.36■■□□□ 1.81
COL23A1Q86Y22 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
COL23A1Q86Y22 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC26.36■■□□□ 1.81
COL23A1Q86Y22 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
COL23A1Q86Y22 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC26.36■■□□□ 1.81
COL23A1Q86Y22 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC26.35■■□□□ 1.81
COL23A1Q86Y22 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
COL23A1Q86Y22 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC26.35■■□□□ 1.81
COL23A1Q86Y22 KRASP1-201ENST00000407852 552 ntBASIC26.35■■□□□ 1.81
COL23A1Q86Y22 AC007322.3-201ENST00000426526 701 ntBASIC26.35■■□□□ 1.81
COL23A1Q86Y22 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC26.35■■□□□ 1.81
COL23A1Q86Y22 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC26.35■■□□□ 1.81
COL23A1Q86Y22 AC120498.8-201ENST00000614275 531 ntBASIC26.35■■□□□ 1.81
COL23A1Q86Y22 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
COL23A1Q86Y22 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
COL23A1Q86Y22 PREB-202ENST00000406567 1910 ntTSL 5 BASIC26.35■■□□□ 1.81
COL23A1Q86Y22 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC26.35■■□□□ 1.81
COL23A1Q86Y22 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
COL23A1Q86Y22 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
COL23A1Q86Y22 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
COL23A1Q86Y22 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC26.34■■□□□ 1.81
COL23A1Q86Y22 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC26.34■■□□□ 1.81
COL23A1Q86Y22 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC26.34■■□□□ 1.81
COL23A1Q86Y22 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC26.34■■□□□ 1.81
COL23A1Q86Y22 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC26.34■■□□□ 1.81
COL23A1Q86Y22 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC26.34■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms