Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.3■□□□□ 0.52
RTTNQ86VV8 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RTTNQ86VV8 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.3■□□□□ 0.52
RTTNQ86VV8 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RTTNQ86VV8 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RTTNQ86VV8 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.29■□□□□ 0.52
RTTNQ86VV8 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RTTNQ86VV8 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC18.29■□□□□ 0.52
RTTNQ86VV8 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.29■□□□□ 0.52
RTTNQ86VV8 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
RTTNQ86VV8 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
RTTNQ86VV8 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RTTNQ86VV8 GALNS-213ENST00000569433 723 ntTSL 3 BASIC18.29■□□□□ 0.52
RTTNQ86VV8 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
RTTNQ86VV8 PKD1P6-201ENST00000343738 4769 ntBASIC18.29■□□□□ 0.52
RTTNQ86VV8 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RTTNQ86VV8 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RTTNQ86VV8 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
RTTNQ86VV8 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RTTNQ86VV8 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
RTTNQ86VV8 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RTTNQ86VV8 STX7-201ENST00000367937 1090 ntTSL 5 BASIC18.29■□□□□ 0.52
RTTNQ86VV8 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC18.29■□□□□ 0.52
RTTNQ86VV8 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.29■□□□□ 0.52
RTTNQ86VV8 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.29■□□□□ 0.52
RTTNQ86VV8 TESC-206ENST00000541210 936 ntTSL 3 BASIC18.29■□□□□ 0.52
RTTNQ86VV8 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.29■□□□□ 0.52
RTTNQ86VV8 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.29■□□□□ 0.52
RTTNQ86VV8 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC18.29■□□□□ 0.52
RTTNQ86VV8 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RTTNQ86VV8 AL109923.1-201ENST00000618799 583 ntBASIC18.29■□□□□ 0.52
RTTNQ86VV8 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
RTTNQ86VV8 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RTTNQ86VV8 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RTTNQ86VV8 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RTTNQ86VV8 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
RTTNQ86VV8 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RTTNQ86VV8 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC18.28■□□□□ 0.52
RTTNQ86VV8 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC18.28■□□□□ 0.52
RTTNQ86VV8 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
RTTNQ86VV8 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
RTTNQ86VV8 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.28■□□□□ 0.52
RTTNQ86VV8 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
RTTNQ86VV8 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RTTNQ86VV8 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RTTNQ86VV8 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.28■□□□□ 0.52
RTTNQ86VV8 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RTTNQ86VV8 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RTTNQ86VV8 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RTTNQ86VV8 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RTTNQ86VV8 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.27■□□□□ 0.52
RTTNQ86VV8 AC080038.1-201ENST00000611274 1154 ntBASIC18.27■□□□□ 0.52
RTTNQ86VV8 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC18.27■□□□□ 0.52
RTTNQ86VV8 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RTTNQ86VV8 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
RTTNQ86VV8 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RTTNQ86VV8 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
RTTNQ86VV8 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.27■□□□□ 0.52
RTTNQ86VV8 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.27■□□□□ 0.52
RTTNQ86VV8 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RTTNQ86VV8 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.27■□□□□ 0.52
RTTNQ86VV8 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RTTNQ86VV8 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
RTTNQ86VV8 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RTTNQ86VV8 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.27■□□□□ 0.52
RTTNQ86VV8 SLC7A5P2-201ENST00000553010 536 ntBASIC18.27■□□□□ 0.52
RTTNQ86VV8 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
RTTNQ86VV8 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
RTTNQ86VV8 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RTTNQ86VV8 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
RTTNQ86VV8 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RTTNQ86VV8 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.27■□□□□ 0.51
RTTNQ86VV8 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.27■□□□□ 0.51
RTTNQ86VV8 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
RTTNQ86VV8 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RTTNQ86VV8 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RTTNQ86VV8 LINC02228-203ENST00000641970 1355 ntBASIC18.26■□□□□ 0.51
RTTNQ86VV8 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RTTNQ86VV8 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.26■□□□□ 0.51
RTTNQ86VV8 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC18.26■□□□□ 0.51
RTTNQ86VV8 AC008687.6-201ENST00000596318 630 ntBASIC18.26■□□□□ 0.51
RTTNQ86VV8 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
RTTNQ86VV8 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RTTNQ86VV8 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC18.26■□□□□ 0.51
RTTNQ86VV8 POU5F1P4-201ENST00000413175 1085 ntBASIC18.26■□□□□ 0.51
RTTNQ86VV8 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
RTTNQ86VV8 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RTTNQ86VV8 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.26■□□□□ 0.51
RTTNQ86VV8 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RTTNQ86VV8 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.26■□□□□ 0.51
RTTNQ86VV8 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC18.26■□□□□ 0.51
RTTNQ86VV8 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC18.26■□□□□ 0.51
RTTNQ86VV8 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RTTNQ86VV8 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RTTNQ86VV8 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RTTNQ86VV8 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RTTNQ86VV8 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RTTNQ86VV8 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RTTNQ86VV8 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.25■□□□□ 0.51
RTTNQ86VV8 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms