Protein–RNA interactions for Protein: Q7Z404

TMC4, Transmembrane channel-like protein 4, humanhuman

Predictions only

Length 712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMC4Q7Z404 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC25.54■■□□□ 1.68
TMC4Q7Z404 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC25.54■■□□□ 1.68
TMC4Q7Z404 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC25.54■■□□□ 1.68
TMC4Q7Z404 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
TMC4Q7Z404 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC25.53■■□□□ 1.68
TMC4Q7Z404 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
TMC4Q7Z404 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
TMC4Q7Z404 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC25.53■■□□□ 1.68
TMC4Q7Z404 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC25.53■■□□□ 1.68
TMC4Q7Z404 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC25.53■■□□□ 1.68
TMC4Q7Z404 FAM197Y4-202ENST00000622692 608 ntBASIC25.53■■□□□ 1.68
TMC4Q7Z404 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
TMC4Q7Z404 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
TMC4Q7Z404 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC25.53■■□□□ 1.68
TMC4Q7Z404 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC25.53■■□□□ 1.68
TMC4Q7Z404 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC25.53■■□□□ 1.68
TMC4Q7Z404 FAM99A-202ENST00000538190 1989 ntBASIC25.53■■□□□ 1.68
TMC4Q7Z404 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC25.52■■□□□ 1.68
TMC4Q7Z404 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC25.52■■□□□ 1.68
TMC4Q7Z404 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
TMC4Q7Z404 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
TMC4Q7Z404 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
TMC4Q7Z404 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
TMC4Q7Z404 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
TMC4Q7Z404 C1QBPP2-201ENST00000528754 825 ntBASIC25.52■■□□□ 1.68
TMC4Q7Z404 REXO2-208ENST00000539754 791 ntTSL 2 BASIC25.52■■□□□ 1.68
TMC4Q7Z404 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC25.52■■□□□ 1.68
TMC4Q7Z404 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC25.52■■□□□ 1.68
TMC4Q7Z404 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC25.52■■□□□ 1.68
TMC4Q7Z404 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
TMC4Q7Z404 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
TMC4Q7Z404 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
TMC4Q7Z404 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC25.51■■□□□ 1.68
TMC4Q7Z404 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC25.51■■□□□ 1.67
TMC4Q7Z404 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
TMC4Q7Z404 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC25.51■■□□□ 1.67
TMC4Q7Z404 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
TMC4Q7Z404 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
TMC4Q7Z404 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
TMC4Q7Z404 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC25.51■■□□□ 1.67
TMC4Q7Z404 SOX15-203ENST00000570788 1093 ntBASIC25.51■■□□□ 1.67
TMC4Q7Z404 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
TMC4Q7Z404 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
TMC4Q7Z404 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC25.51■■□□□ 1.67
TMC4Q7Z404 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
TMC4Q7Z404 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
TMC4Q7Z404 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC25.51■■□□□ 1.67
TMC4Q7Z404 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC25.51■■□□□ 1.67
TMC4Q7Z404 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC25.51■■□□□ 1.67
TMC4Q7Z404 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
TMC4Q7Z404 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
TMC4Q7Z404 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
TMC4Q7Z404 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
TMC4Q7Z404 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC25.5■■□□□ 1.67
TMC4Q7Z404 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC25.5■■□□□ 1.67
TMC4Q7Z404 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
TMC4Q7Z404 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
TMC4Q7Z404 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC25.5■■□□□ 1.67
TMC4Q7Z404 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
TMC4Q7Z404 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC25.5■■□□□ 1.67
TMC4Q7Z404 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC25.5■■□□□ 1.67
TMC4Q7Z404 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC25.5■■□□□ 1.67
TMC4Q7Z404 AC069544.1-201ENST00000609399 999 ntBASIC25.5■■□□□ 1.67
TMC4Q7Z404 AC116050.2-201ENST00000612102 1779 ntBASIC25.5■■□□□ 1.67
TMC4Q7Z404 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
TMC4Q7Z404 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
TMC4Q7Z404 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC25.5■■□□□ 1.67
TMC4Q7Z404 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC25.5■■□□□ 1.67
TMC4Q7Z404 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC25.49■■□□□ 1.67
TMC4Q7Z404 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC25.49■■□□□ 1.67
TMC4Q7Z404 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC25.49■■□□□ 1.67
TMC4Q7Z404 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
TMC4Q7Z404 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC25.49■■□□□ 1.67
TMC4Q7Z404 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
TMC4Q7Z404 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
TMC4Q7Z404 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC25.49■■□□□ 1.67
TMC4Q7Z404 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
TMC4Q7Z404 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC25.49■■□□□ 1.67
TMC4Q7Z404 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC25.49■■□□□ 1.67
TMC4Q7Z404 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC25.49■■□□□ 1.67
TMC4Q7Z404 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC25.49■■□□□ 1.67
TMC4Q7Z404 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
TMC4Q7Z404 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC25.49■■□□□ 1.67
TMC4Q7Z404 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
TMC4Q7Z404 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC25.49■■□□□ 1.67
TMC4Q7Z404 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC25.48■■□□□ 1.67
TMC4Q7Z404 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC25.48■■□□□ 1.67
TMC4Q7Z404 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC25.48■■□□□ 1.67
TMC4Q7Z404 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC25.48■■□□□ 1.67
TMC4Q7Z404 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
TMC4Q7Z404 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC25.48■■□□□ 1.67
TMC4Q7Z404 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC25.48■■□□□ 1.67
TMC4Q7Z404 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
TMC4Q7Z404 POM121L13P-201ENST00000422362 380 ntBASIC25.48■■□□□ 1.67
TMC4Q7Z404 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC25.48■■□□□ 1.67
TMC4Q7Z404 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
TMC4Q7Z404 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
TMC4Q7Z404 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC25.48■■□□□ 1.67
TMC4Q7Z404 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
TMC4Q7Z404 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC25.48■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 10.6 ms