Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
COLCA1Q6ZS62 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COLCA1Q6ZS62 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COLCA1Q6ZS62 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
COLCA1Q6ZS62 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COLCA1Q6ZS62 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC17.91■□□□□ 0.46
COLCA1Q6ZS62 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COLCA1Q6ZS62 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
COLCA1Q6ZS62 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC17.91■□□□□ 0.46
COLCA1Q6ZS62 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COLCA1Q6ZS62 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
COLCA1Q6ZS62 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
COLCA1Q6ZS62 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC17.91■□□□□ 0.46
COLCA1Q6ZS62 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC17.91■□□□□ 0.46
COLCA1Q6ZS62 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COLCA1Q6ZS62 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
COLCA1Q6ZS62 UBE2DNL-204ENST00000602536 740 ntBASIC17.91■□□□□ 0.46
COLCA1Q6ZS62 FGF8-207ENST00000618991 856 ntTSL 3 BASIC17.91■□□□□ 0.46
COLCA1Q6ZS62 MYCNOS-205ENST00000641950 531 ntBASIC17.91■□□□□ 0.46
COLCA1Q6ZS62 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
COLCA1Q6ZS62 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COLCA1Q6ZS62 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC17.91■□□□□ 0.46
COLCA1Q6ZS62 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
COLCA1Q6ZS62 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
COLCA1Q6ZS62 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
COLCA1Q6ZS62 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
COLCA1Q6ZS62 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
COLCA1Q6ZS62 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
COLCA1Q6ZS62 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
COLCA1Q6ZS62 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
COLCA1Q6ZS62 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
COLCA1Q6ZS62 STX7-201ENST00000367937 1090 ntTSL 5 BASIC17.9■□□□□ 0.46
COLCA1Q6ZS62 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC17.9■□□□□ 0.46
COLCA1Q6ZS62 MIR5787-201ENST00000611784 55 ntBASIC17.9■□□□□ 0.46
COLCA1Q6ZS62 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
COLCA1Q6ZS62 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
COLCA1Q6ZS62 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COLCA1Q6ZS62 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
COLCA1Q6ZS62 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COLCA1Q6ZS62 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COLCA1Q6ZS62 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COLCA1Q6ZS62 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
COLCA1Q6ZS62 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
COLCA1Q6ZS62 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
COLCA1Q6ZS62 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.45
COLCA1Q6ZS62 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
COLCA1Q6ZS62 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC17.89■□□□□ 0.45
COLCA1Q6ZS62 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
COLCA1Q6ZS62 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC17.89■□□□□ 0.45
COLCA1Q6ZS62 DBI-210ENST00000542275 757 ntTSL 5 BASIC17.89■□□□□ 0.45
COLCA1Q6ZS62 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC17.89■□□□□ 0.45
COLCA1Q6ZS62 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC17.89■□□□□ 0.45
COLCA1Q6ZS62 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
COLCA1Q6ZS62 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
COLCA1Q6ZS62 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
COLCA1Q6ZS62 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC17.89■□□□□ 0.45
COLCA1Q6ZS62 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC17.89■□□□□ 0.45
COLCA1Q6ZS62 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC17.89■□□□□ 0.45
COLCA1Q6ZS62 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
COLCA1Q6ZS62 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC17.88■□□□□ 0.45
COLCA1Q6ZS62 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
COLCA1Q6ZS62 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COLCA1Q6ZS62 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
COLCA1Q6ZS62 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
COLCA1Q6ZS62 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COLCA1Q6ZS62 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC17.88■□□□□ 0.45
COLCA1Q6ZS62 PARP1-202ENST00000366792 553 ntTSL 3 BASIC17.88■□□□□ 0.45
COLCA1Q6ZS62 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
COLCA1Q6ZS62 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC17.88■□□□□ 0.45
COLCA1Q6ZS62 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
COLCA1Q6ZS62 AC091799.1-201ENST00000422823 811 ntBASIC17.88■□□□□ 0.45
COLCA1Q6ZS62 KRT18P11-201ENST00000435214 1283 ntBASIC17.88■□□□□ 0.45
COLCA1Q6ZS62 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC17.88■□□□□ 0.45
COLCA1Q6ZS62 CD44-222ENST00000526025 1052 ntTSL 2 BASIC17.88■□□□□ 0.45
COLCA1Q6ZS62 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COLCA1Q6ZS62 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC17.88■□□□□ 0.45
COLCA1Q6ZS62 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
COLCA1Q6ZS62 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COLCA1Q6ZS62 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC17.88■□□□□ 0.45
COLCA1Q6ZS62 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
COLCA1Q6ZS62 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COLCA1Q6ZS62 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COLCA1Q6ZS62 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
COLCA1Q6ZS62 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
COLCA1Q6ZS62 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC17.87■□□□□ 0.45
COLCA1Q6ZS62 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
COLCA1Q6ZS62 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
COLCA1Q6ZS62 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
COLCA1Q6ZS62 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
COLCA1Q6ZS62 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
COLCA1Q6ZS62 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
COLCA1Q6ZS62 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
COLCA1Q6ZS62 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC17.87■□□□□ 0.45
COLCA1Q6ZS62 HSCB-202ENST00000398941 955 ntTSL 2 BASIC17.87■□□□□ 0.45
COLCA1Q6ZS62 PTPA-214ENST00000423100 988 ntTSL 2 BASIC17.87■□□□□ 0.45
COLCA1Q6ZS62 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
COLCA1Q6ZS62 AL162430.1-201ENST00000480705 870 ntBASIC17.87■□□□□ 0.45
COLCA1Q6ZS62 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC17.87■□□□□ 0.45
COLCA1Q6ZS62 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC17.87■□□□□ 0.45
COLCA1Q6ZS62 ANKRD20A6P-201ENST00000618763 204 ntBASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms