Protein–RNA interactions for Protein: Q6W349

LINC00575, Putative uncharacterized protein encoded by LINC00575, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00575Q6W349 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC13.16□□□□□ -0.3
LINC00575Q6W349 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC13.16□□□□□ -0.3
LINC00575Q6W349 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00575Q6W349 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC13.16□□□□□ -0.3
LINC00575Q6W349 ABHD17AP3-201ENST00000503096 1137 ntBASIC13.16□□□□□ -0.3
LINC00575Q6W349 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00575Q6W349 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00575Q6W349 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC13.16□□□□□ -0.3
LINC00575Q6W349 PVT1_1.1-201ENST00000615125 194 ntBASIC13.16□□□□□ -0.3
LINC00575Q6W349 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
LINC00575Q6W349 AC068587.7-201ENST00000641602 218 ntBASIC13.16□□□□□ -0.3
LINC00575Q6W349 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00575Q6W349 AL512408.1-201ENST00000569378 2000 ntBASIC13.16□□□□□ -0.3
LINC00575Q6W349 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00575Q6W349 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
LINC00575Q6W349 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00575Q6W349 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00575Q6W349 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC13.16□□□□□ -0.3
LINC00575Q6W349 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00575Q6W349 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00575Q6W349 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00575Q6W349 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00575Q6W349 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00575Q6W349 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
LINC00575Q6W349 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC13.16□□□□□ -0.3
LINC00575Q6W349 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00575Q6W349 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC13.15□□□□□ -0.3
LINC00575Q6W349 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00575Q6W349 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00575Q6W349 AC099778.1-201ENST00000568593 1911 ntBASIC13.15□□□□□ -0.3
LINC00575Q6W349 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00575Q6W349 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC13.15□□□□□ -0.3
LINC00575Q6W349 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00575Q6W349 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
LINC00575Q6W349 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00575Q6W349 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC13.15□□□□□ -0.3
LINC00575Q6W349 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00575Q6W349 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
LINC00575Q6W349 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00575Q6W349 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
LINC00575Q6W349 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00575Q6W349 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
LINC00575Q6W349 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
LINC00575Q6W349 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00575Q6W349 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00575Q6W349 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00575Q6W349 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC13.15□□□□□ -0.3
LINC00575Q6W349 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
LINC00575Q6W349 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00575Q6W349 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00575Q6W349 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC13.15□□□□□ -0.3
LINC00575Q6W349 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC13.15□□□□□ -0.3
LINC00575Q6W349 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00575Q6W349 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00575Q6W349 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC13.15□□□□□ -0.3
LINC00575Q6W349 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC13.15□□□□□ -0.3
LINC00575Q6W349 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00575Q6W349 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00575Q6W349 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00575Q6W349 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00575Q6W349 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
LINC00575Q6W349 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00575Q6W349 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00575Q6W349 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC00575Q6W349 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC13.15□□□□□ -0.3
LINC00575Q6W349 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
LINC00575Q6W349 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC13.15□□□□□ -0.31
LINC00575Q6W349 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC13.15□□□□□ -0.31
LINC00575Q6W349 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
LINC00575Q6W349 MCC-208ENST00000514701 2855 ntTSL 2 BASIC13.14□□□□□ -0.31
LINC00575Q6W349 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00575Q6W349 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00575Q6W349 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00575Q6W349 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC13.14□□□□□ -0.31
LINC00575Q6W349 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
LINC00575Q6W349 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00575Q6W349 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00575Q6W349 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00575Q6W349 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
LINC00575Q6W349 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00575Q6W349 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00575Q6W349 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00575Q6W349 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
LINC00575Q6W349 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00575Q6W349 CLTA-206ENST00000466396 695 ntTSL 2 BASIC13.14□□□□□ -0.31
LINC00575Q6W349 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
LINC00575Q6W349 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC13.14□□□□□ -0.31
LINC00575Q6W349 AC137630.3-201ENST00000607245 391 ntBASIC13.14□□□□□ -0.31
LINC00575Q6W349 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00575Q6W349 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC13.14□□□□□ -0.31
LINC00575Q6W349 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00575Q6W349 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00575Q6W349 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
LINC00575Q6W349 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC13.14□□□□□ -0.31
LINC00575Q6W349 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00575Q6W349 BID-203ENST00000399765 1879 ntTSL 2 BASIC13.14□□□□□ -0.31
LINC00575Q6W349 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00575Q6W349 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC00575Q6W349 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00575Q6W349 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms