Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 PPP1R14BP3-201ENST00000509033 445 ntBASIC21.67■■□□□ 1.06
RFWD3Q6PCD5 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
RFWD3Q6PCD5 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC21.67■■□□□ 1.06
RFWD3Q6PCD5 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
RFWD3Q6PCD5 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
RFWD3Q6PCD5 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RFWD3Q6PCD5 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RFWD3Q6PCD5 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RFWD3Q6PCD5 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RFWD3Q6PCD5 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
RFWD3Q6PCD5 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RFWD3Q6PCD5 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.67■■□□□ 1.06
RFWD3Q6PCD5 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.66■■□□□ 1.06
RFWD3Q6PCD5 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC21.66■■□□□ 1.06
RFWD3Q6PCD5 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
RFWD3Q6PCD5 KRT16P2-201ENST00000414673 1423 ntBASIC21.66■■□□□ 1.06
RFWD3Q6PCD5 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RFWD3Q6PCD5 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RFWD3Q6PCD5 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RFWD3Q6PCD5 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RFWD3Q6PCD5 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
RFWD3Q6PCD5 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RFWD3Q6PCD5 TERF1P5-201ENST00000477545 1207 ntBASIC21.66■■□□□ 1.06
RFWD3Q6PCD5 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC21.66■■□□□ 1.06
RFWD3Q6PCD5 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC21.66■■□□□ 1.06
RFWD3Q6PCD5 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC21.66■■□□□ 1.06
RFWD3Q6PCD5 AC231657.2-201ENST00000624556 255 ntBASIC21.66■■□□□ 1.06
RFWD3Q6PCD5 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RFWD3Q6PCD5 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RFWD3Q6PCD5 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.66■■□□□ 1.06
RFWD3Q6PCD5 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RFWD3Q6PCD5 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
RFWD3Q6PCD5 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RFWD3Q6PCD5 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RFWD3Q6PCD5 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.65■■□□□ 1.06
RFWD3Q6PCD5 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC21.65■■□□□ 1.06
RFWD3Q6PCD5 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RFWD3Q6PCD5 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RFWD3Q6PCD5 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RFWD3Q6PCD5 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RFWD3Q6PCD5 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC21.64■■□□□ 1.06
RFWD3Q6PCD5 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.06
RFWD3Q6PCD5 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.64■■□□□ 1.06
RFWD3Q6PCD5 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
RFWD3Q6PCD5 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
RFWD3Q6PCD5 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RFWD3Q6PCD5 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
RFWD3Q6PCD5 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
RFWD3Q6PCD5 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
RFWD3Q6PCD5 ID1-201ENST00000376105 1233 ntBASIC21.64■■□□□ 1.05
RFWD3Q6PCD5 MAP2K4P1-201ENST00000438453 1195 ntBASIC21.64■■□□□ 1.05
RFWD3Q6PCD5 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC21.64■■□□□ 1.05
RFWD3Q6PCD5 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC21.64■■□□□ 1.05
RFWD3Q6PCD5 AL050303.2-201ENST00000619798 666 ntBASIC21.64■■□□□ 1.05
RFWD3Q6PCD5 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC21.64■■□□□ 1.05
RFWD3Q6PCD5 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RFWD3Q6PCD5 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.64■■□□□ 1.05
RFWD3Q6PCD5 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.64■■□□□ 1.05
RFWD3Q6PCD5 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
RFWD3Q6PCD5 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RFWD3Q6PCD5 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RFWD3Q6PCD5 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RFWD3Q6PCD5 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
RFWD3Q6PCD5 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.64■■□□□ 1.05
RFWD3Q6PCD5 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RFWD3Q6PCD5 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RFWD3Q6PCD5 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RFWD3Q6PCD5 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.63■■□□□ 1.05
RFWD3Q6PCD5 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC21.63■■□□□ 1.05
RFWD3Q6PCD5 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
RFWD3Q6PCD5 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC21.63■■□□□ 1.05
RFWD3Q6PCD5 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21.63■■□□□ 1.05
RFWD3Q6PCD5 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.63■■□□□ 1.05
RFWD3Q6PCD5 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RFWD3Q6PCD5 AC005181.1-201ENST00000604782 1256 ntBASIC21.63■■□□□ 1.05
RFWD3Q6PCD5 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC21.63■■□□□ 1.05
RFWD3Q6PCD5 FGF8-207ENST00000618991 856 ntTSL 3 BASIC21.63■■□□□ 1.05
RFWD3Q6PCD5 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
RFWD3Q6PCD5 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RFWD3Q6PCD5 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RFWD3Q6PCD5 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RFWD3Q6PCD5 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RFWD3Q6PCD5 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RFWD3Q6PCD5 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.62■■□□□ 1.05
RFWD3Q6PCD5 HLA-L-209ENST00000420110 1011 ntBASIC21.62■■□□□ 1.05
RFWD3Q6PCD5 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC21.62■■□□□ 1.05
RFWD3Q6PCD5 WT1-AS_3.1-201ENST00000613262 234 ntBASIC21.62■■□□□ 1.05
RFWD3Q6PCD5 PARP1-210ENST00000629232 477 ntTSL 5 BASIC21.62■■□□□ 1.05
RFWD3Q6PCD5 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.62■■□□□ 1.05
RFWD3Q6PCD5 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RFWD3Q6PCD5 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RFWD3Q6PCD5 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RFWD3Q6PCD5 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC21.61■■□□□ 1.05
RFWD3Q6PCD5 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
RFWD3Q6PCD5 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.61■■□□□ 1.05
RFWD3Q6PCD5 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
RFWD3Q6PCD5 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RFWD3Q6PCD5 AL121603.2-201ENST00000557373 2117 ntBASIC21.61■■□□□ 1.05
RFWD3Q6PCD5 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RFWD3Q6PCD5 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms