Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
RC3H1Q5TC82 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC26.47■■□□□ 1.83
RC3H1Q5TC82 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC26.47■■□□□ 1.83
RC3H1Q5TC82 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
RC3H1Q5TC82 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
RC3H1Q5TC82 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC26.47■■□□□ 1.83
RC3H1Q5TC82 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
RC3H1Q5TC82 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC26.47■■□□□ 1.83
RC3H1Q5TC82 NARF-205ENST00000412079 1760 ntTSL 5 BASIC26.47■■□□□ 1.83
RC3H1Q5TC82 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC26.47■■□□□ 1.83
RC3H1Q5TC82 COMT-203ENST00000403184 2217 ntTSL 2 BASIC26.46■■□□□ 1.83
RC3H1Q5TC82 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC26.46■■□□□ 1.83
RC3H1Q5TC82 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
RC3H1Q5TC82 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
RC3H1Q5TC82 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC26.46■■□□□ 1.83
RC3H1Q5TC82 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
RC3H1Q5TC82 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC26.46■■□□□ 1.83
RC3H1Q5TC82 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC26.46■■□□□ 1.83
RC3H1Q5TC82 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
RC3H1Q5TC82 LINC01023-201ENST00000606054 436 ntBASIC26.46■■□□□ 1.83
RC3H1Q5TC82 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
RC3H1Q5TC82 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC26.46■■□□□ 1.83
RC3H1Q5TC82 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
RC3H1Q5TC82 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC26.46■■□□□ 1.83
RC3H1Q5TC82 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC26.46■■□□□ 1.83
RC3H1Q5TC82 AC026471.6-201ENST00000622954 1905 ntBASIC26.45■■□□□ 1.83
RC3H1Q5TC82 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
RC3H1Q5TC82 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC26.45■■□□□ 1.82
RC3H1Q5TC82 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
RC3H1Q5TC82 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC26.45■■□□□ 1.82
RC3H1Q5TC82 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC26.45■■□□□ 1.82
RC3H1Q5TC82 MIR1224-201ENST00000408193 85 ntBASIC26.45■■□□□ 1.82
RC3H1Q5TC82 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC26.45■■□□□ 1.82
RC3H1Q5TC82 MTDHP1-201ENST00000605323 784 ntBASIC26.45■■□□□ 1.82
RC3H1Q5TC82 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC26.45■■□□□ 1.82
RC3H1Q5TC82 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
RC3H1Q5TC82 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC26.44■■□□□ 1.82
RC3H1Q5TC82 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC26.44■■□□□ 1.82
RC3H1Q5TC82 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
RC3H1Q5TC82 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
RC3H1Q5TC82 RPS2P55-201ENST00000397318 883 ntBASIC26.44■■□□□ 1.82
RC3H1Q5TC82 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
RC3H1Q5TC82 AC133681.1-201ENST00000465482 601 ntBASIC26.44■■□□□ 1.82
RC3H1Q5TC82 AC107956.1-201ENST00000494359 873 ntBASIC26.44■■□□□ 1.82
RC3H1Q5TC82 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC26.44■■□□□ 1.82
RC3H1Q5TC82 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
RC3H1Q5TC82 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
RC3H1Q5TC82 AC068473.5-201ENST00000616428 2072 ntBASIC26.43■■□□□ 1.82
RC3H1Q5TC82 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
RC3H1Q5TC82 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC26.43■■□□□ 1.82
RC3H1Q5TC82 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC26.43■■□□□ 1.82
RC3H1Q5TC82 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
RC3H1Q5TC82 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
RC3H1Q5TC82 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC26.43■■□□□ 1.82
RC3H1Q5TC82 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
RC3H1Q5TC82 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
RC3H1Q5TC82 BX088651.1-201ENST00000540551 451 ntBASIC26.43■■□□□ 1.82
RC3H1Q5TC82 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC26.43■■□□□ 1.82
RC3H1Q5TC82 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
RC3H1Q5TC82 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC26.43■■□□□ 1.82
RC3H1Q5TC82 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
RC3H1Q5TC82 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
RC3H1Q5TC82 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC26.42■■□□□ 1.82
RC3H1Q5TC82 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
RC3H1Q5TC82 STX5-203ENST00000394690 1568 ntTSL 5 BASIC26.42■■□□□ 1.82
RC3H1Q5TC82 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
RC3H1Q5TC82 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC26.42■■□□□ 1.82
RC3H1Q5TC82 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
RC3H1Q5TC82 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
RC3H1Q5TC82 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
RC3H1Q5TC82 C2orf69P4-201ENST00000565394 541 ntBASIC26.42■■□□□ 1.82
RC3H1Q5TC82 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC26.42■■□□□ 1.82
RC3H1Q5TC82 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC26.42■■□□□ 1.82
RC3H1Q5TC82 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC26.42■■□□□ 1.82
RC3H1Q5TC82 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
RC3H1Q5TC82 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC26.42■■□□□ 1.82
RC3H1Q5TC82 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
RC3H1Q5TC82 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC26.42■■□□□ 1.82
RC3H1Q5TC82 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC26.41■■□□□ 1.82
RC3H1Q5TC82 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
RC3H1Q5TC82 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC26.41■■□□□ 1.82
RC3H1Q5TC82 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC26.41■■□□□ 1.82
RC3H1Q5TC82 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC26.41■■□□□ 1.82
RC3H1Q5TC82 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
RC3H1Q5TC82 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC26.41■■□□□ 1.82
RC3H1Q5TC82 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC26.41■■□□□ 1.82
RC3H1Q5TC82 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC26.41■■□□□ 1.82
RC3H1Q5TC82 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC26.41■■□□□ 1.82
RC3H1Q5TC82 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC26.41■■□□□ 1.82
RC3H1Q5TC82 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC26.41■■□□□ 1.82
RC3H1Q5TC82 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
RC3H1Q5TC82 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC26.41■■□□□ 1.82
RC3H1Q5TC82 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC26.41■■□□□ 1.82
RC3H1Q5TC82 PKM-204ENST00000449901 2526 ntTSL 2 BASIC26.4■■□□□ 1.82
RC3H1Q5TC82 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
RC3H1Q5TC82 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC26.4■■□□□ 1.82
RC3H1Q5TC82 SERF2-207ENST00000409614 582 ntTSL 2 BASIC26.4■■□□□ 1.82
RC3H1Q5TC82 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC26.4■■□□□ 1.82
RC3H1Q5TC82 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
RC3H1Q5TC82 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC26.4■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms