Protein–RNA interactions for Protein: Q5TB30

DEPDC1, DEP domain-containing protein 1A, humanhuman

Predictions only

Length 811 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1Q5TB30 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.08■□□□□ 0.81
DEPDC1Q5TB30 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.08■□□□□ 0.81
DEPDC1Q5TB30 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.08■□□□□ 0.81
DEPDC1Q5TB30 CCDC92B-201ENST00000575506 885 ntBASIC20.08■□□□□ 0.81
DEPDC1Q5TB30 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.08■□□□□ 0.81
DEPDC1Q5TB30 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
DEPDC1Q5TB30 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
DEPDC1Q5TB30 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
DEPDC1Q5TB30 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
DEPDC1Q5TB30 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
DEPDC1Q5TB30 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
DEPDC1Q5TB30 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
DEPDC1Q5TB30 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
DEPDC1Q5TB30 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
DEPDC1Q5TB30 AC005229.4-201ENST00000610085 2198 ntBASIC20.07■□□□□ 0.8
DEPDC1Q5TB30 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.07■□□□□ 0.8
DEPDC1Q5TB30 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.07■□□□□ 0.8
DEPDC1Q5TB30 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
DEPDC1Q5TB30 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
DEPDC1Q5TB30 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
DEPDC1Q5TB30 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
DEPDC1Q5TB30 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.07■□□□□ 0.8
DEPDC1Q5TB30 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.07■□□□□ 0.8
DEPDC1Q5TB30 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
DEPDC1Q5TB30 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
DEPDC1Q5TB30 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
DEPDC1Q5TB30 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
DEPDC1Q5TB30 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.06■□□□□ 0.8
DEPDC1Q5TB30 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
DEPDC1Q5TB30 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
DEPDC1Q5TB30 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
DEPDC1Q5TB30 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
DEPDC1Q5TB30 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
DEPDC1Q5TB30 KRT18P14-201ENST00000534205 1250 ntBASIC20.06■□□□□ 0.8
DEPDC1Q5TB30 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.06■□□□□ 0.8
DEPDC1Q5TB30 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
DEPDC1Q5TB30 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.06■□□□□ 0.8
DEPDC1Q5TB30 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.06■□□□□ 0.8
DEPDC1Q5TB30 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
DEPDC1Q5TB30 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
DEPDC1Q5TB30 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
DEPDC1Q5TB30 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
DEPDC1Q5TB30 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
DEPDC1Q5TB30 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
DEPDC1Q5TB30 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.06■□□□□ 0.8
DEPDC1Q5TB30 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
DEPDC1Q5TB30 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
DEPDC1Q5TB30 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
DEPDC1Q5TB30 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
DEPDC1Q5TB30 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
DEPDC1Q5TB30 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.05■□□□□ 0.8
DEPDC1Q5TB30 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
DEPDC1Q5TB30 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
DEPDC1Q5TB30 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.05■□□□□ 0.8
DEPDC1Q5TB30 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
DEPDC1Q5TB30 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20.05■□□□□ 0.8
DEPDC1Q5TB30 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
DEPDC1Q5TB30 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.05■□□□□ 0.8
DEPDC1Q5TB30 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.05■□□□□ 0.8
DEPDC1Q5TB30 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
DEPDC1Q5TB30 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
DEPDC1Q5TB30 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
DEPDC1Q5TB30 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
DEPDC1Q5TB30 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
DEPDC1Q5TB30 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
DEPDC1Q5TB30 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
DEPDC1Q5TB30 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
DEPDC1Q5TB30 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
DEPDC1Q5TB30 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.04■□□□□ 0.8
DEPDC1Q5TB30 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.04■□□□□ 0.8
DEPDC1Q5TB30 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
DEPDC1Q5TB30 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
DEPDC1Q5TB30 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.04■□□□□ 0.8
DEPDC1Q5TB30 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
DEPDC1Q5TB30 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
DEPDC1Q5TB30 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
DEPDC1Q5TB30 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
DEPDC1Q5TB30 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
DEPDC1Q5TB30 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.04■□□□□ 0.8
DEPDC1Q5TB30 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
DEPDC1Q5TB30 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
DEPDC1Q5TB30 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
DEPDC1Q5TB30 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
DEPDC1Q5TB30 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.03■□□□□ 0.8
DEPDC1Q5TB30 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
DEPDC1Q5TB30 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
DEPDC1Q5TB30 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
DEPDC1Q5TB30 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.03■□□□□ 0.8
DEPDC1Q5TB30 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
DEPDC1Q5TB30 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.03■□□□□ 0.8
DEPDC1Q5TB30 AC138907.5-202ENST00000569484 235 ntBASIC20.03■□□□□ 0.8
DEPDC1Q5TB30 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.03■□□□□ 0.8
DEPDC1Q5TB30 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
DEPDC1Q5TB30 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.03■□□□□ 0.8
DEPDC1Q5TB30 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
DEPDC1Q5TB30 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.03■□□□□ 0.8
DEPDC1Q5TB30 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
DEPDC1Q5TB30 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.03■□□□□ 0.8
DEPDC1Q5TB30 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
DEPDC1Q5TB30 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms