Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC23.84■■□□□ 1.41
COL13A1Q5TAT6 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC23.84■■□□□ 1.41
COL13A1Q5TAT6 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC23.84■■□□□ 1.41
COL13A1Q5TAT6 KRT16P2-201ENST00000414673 1423 ntBASIC23.84■■□□□ 1.41
COL13A1Q5TAT6 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC23.83■■□□□ 1.41
COL13A1Q5TAT6 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
COL13A1Q5TAT6 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC23.83■■□□□ 1.41
COL13A1Q5TAT6 IER3-202ENST00000376377 1350 ntBASIC23.83■■□□□ 1.41
COL13A1Q5TAT6 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
COL13A1Q5TAT6 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC23.83■■□□□ 1.41
COL13A1Q5TAT6 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
COL13A1Q5TAT6 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
COL13A1Q5TAT6 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC23.83■■□□□ 1.41
COL13A1Q5TAT6 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
COL13A1Q5TAT6 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
COL13A1Q5TAT6 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC23.83■■□□□ 1.41
COL13A1Q5TAT6 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC23.83■■□□□ 1.41
COL13A1Q5TAT6 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC23.83■■□□□ 1.41
COL13A1Q5TAT6 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
COL13A1Q5TAT6 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
COL13A1Q5TAT6 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
COL13A1Q5TAT6 FAM86EP-206ENST00000510506 987 ntBASIC23.82■■□□□ 1.4
COL13A1Q5TAT6 CD320-202ENST00000537716 1119 ntTSL 2 BASIC23.82■■□□□ 1.4
COL13A1Q5TAT6 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC23.82■■□□□ 1.4
COL13A1Q5TAT6 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC23.82■■□□□ 1.4
COL13A1Q5TAT6 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
COL13A1Q5TAT6 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
COL13A1Q5TAT6 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
COL13A1Q5TAT6 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
COL13A1Q5TAT6 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
COL13A1Q5TAT6 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
COL13A1Q5TAT6 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC23.81■■□□□ 1.4
COL13A1Q5TAT6 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
COL13A1Q5TAT6 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC23.81■■□□□ 1.4
COL13A1Q5TAT6 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC23.81■■□□□ 1.4
COL13A1Q5TAT6 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
COL13A1Q5TAT6 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
COL13A1Q5TAT6 AP004607.7-201ENST00000527152 1677 ntBASIC23.8■■□□□ 1.4
COL13A1Q5TAT6 AL022342.1-201ENST00000400363 863 ntBASIC23.8■■□□□ 1.4
COL13A1Q5TAT6 AC091390.4-202ENST00000476426 537 ntBASIC23.8■■□□□ 1.4
COL13A1Q5TAT6 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC23.8■■□□□ 1.4
COL13A1Q5TAT6 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC23.8■■□□□ 1.4
COL13A1Q5TAT6 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC23.8■■□□□ 1.4
COL13A1Q5TAT6 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC23.8■■□□□ 1.4
COL13A1Q5TAT6 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
COL13A1Q5TAT6 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC23.79■■□□□ 1.4
COL13A1Q5TAT6 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
COL13A1Q5TAT6 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
COL13A1Q5TAT6 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC23.79■■□□□ 1.4
COL13A1Q5TAT6 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC23.79■■□□□ 1.4
COL13A1Q5TAT6 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC23.79■■□□□ 1.4
COL13A1Q5TAT6 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
COL13A1Q5TAT6 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC23.79■■□□□ 1.4
COL13A1Q5TAT6 GCK-205ENST00000437084 1385 ntTSL 5 BASIC23.78■■□□□ 1.4
COL13A1Q5TAT6 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
COL13A1Q5TAT6 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
COL13A1Q5TAT6 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
COL13A1Q5TAT6 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC23.78■■□□□ 1.4
COL13A1Q5TAT6 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC23.78■■□□□ 1.4
COL13A1Q5TAT6 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC23.78■■□□□ 1.4
COL13A1Q5TAT6 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC23.78■■□□□ 1.4
COL13A1Q5TAT6 AP006587.3-201ENST00000525742 1516 ntBASIC23.78■■□□□ 1.4
COL13A1Q5TAT6 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
COL13A1Q5TAT6 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC23.78■■□□□ 1.4
COL13A1Q5TAT6 KRT8P10-201ENST00000450021 1447 ntBASIC23.77■■□□□ 1.4
COL13A1Q5TAT6 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
COL13A1Q5TAT6 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC23.77■■□□□ 1.4
COL13A1Q5TAT6 AC117947.1-201ENST00000427448 529 ntBASIC23.77■■□□□ 1.4
COL13A1Q5TAT6 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
COL13A1Q5TAT6 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
COL13A1Q5TAT6 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
COL13A1Q5TAT6 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC23.77■■□□□ 1.4
COL13A1Q5TAT6 RN7SL510P-201ENST00000581311 263 ntBASIC23.77■■□□□ 1.4
COL13A1Q5TAT6 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
COL13A1Q5TAT6 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
COL13A1Q5TAT6 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
COL13A1Q5TAT6 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
COL13A1Q5TAT6 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
COL13A1Q5TAT6 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
COL13A1Q5TAT6 DUSP8P3-201ENST00000399571 1760 ntBASIC23.76■■□□□ 1.39
COL13A1Q5TAT6 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
COL13A1Q5TAT6 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
COL13A1Q5TAT6 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC23.76■■□□□ 1.39
COL13A1Q5TAT6 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC23.76■■□□□ 1.39
COL13A1Q5TAT6 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC23.76■■□□□ 1.39
COL13A1Q5TAT6 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC23.76■■□□□ 1.39
COL13A1Q5TAT6 AC073195.1-201ENST00000607241 877 ntBASIC23.76■■□□□ 1.39
COL13A1Q5TAT6 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
COL13A1Q5TAT6 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC23.76■■□□□ 1.39
COL13A1Q5TAT6 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
COL13A1Q5TAT6 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
COL13A1Q5TAT6 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
COL13A1Q5TAT6 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC23.75■■□□□ 1.39
COL13A1Q5TAT6 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
COL13A1Q5TAT6 AL353807.1-201ENST00000427475 662 ntBASIC23.75■■□□□ 1.39
COL13A1Q5TAT6 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC23.75■■□□□ 1.39
COL13A1Q5TAT6 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC23.75■■□□□ 1.39
COL13A1Q5TAT6 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC23.75■■□□□ 1.39
COL13A1Q5TAT6 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC23.75■■□□□ 1.39
COL13A1Q5TAT6 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms