Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RUNDC3AQ59EK9 BX005040.4-201ENST00000637145 1518 ntBASIC19.62■□□□□ 0.73
RUNDC3AQ59EK9 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RUNDC3AQ59EK9 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
RUNDC3AQ59EK9 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RUNDC3AQ59EK9 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.62■□□□□ 0.73
RUNDC3AQ59EK9 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RUNDC3AQ59EK9 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC19.62■□□□□ 0.73
RUNDC3AQ59EK9 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RUNDC3AQ59EK9 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RUNDC3AQ59EK9 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RUNDC3AQ59EK9 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
RUNDC3AQ59EK9 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RUNDC3AQ59EK9 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RUNDC3AQ59EK9 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RUNDC3AQ59EK9 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
RUNDC3AQ59EK9 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
RUNDC3AQ59EK9 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.62■□□□□ 0.73
RUNDC3AQ59EK9 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RUNDC3AQ59EK9 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.62■□□□□ 0.73
RUNDC3AQ59EK9 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RUNDC3AQ59EK9 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
RUNDC3AQ59EK9 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RUNDC3AQ59EK9 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RUNDC3AQ59EK9 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RUNDC3AQ59EK9 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RUNDC3AQ59EK9 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
RUNDC3AQ59EK9 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.61■□□□□ 0.73
RUNDC3AQ59EK9 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RUNDC3AQ59EK9 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
RUNDC3AQ59EK9 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.61■□□□□ 0.73
RUNDC3AQ59EK9 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.61■□□□□ 0.73
RUNDC3AQ59EK9 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.61■□□□□ 0.73
RUNDC3AQ59EK9 AC024257.2-201ENST00000549699 147 ntBASIC19.61■□□□□ 0.73
RUNDC3AQ59EK9 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RUNDC3AQ59EK9 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
RUNDC3AQ59EK9 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RUNDC3AQ59EK9 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
RUNDC3AQ59EK9 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RUNDC3AQ59EK9 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RUNDC3AQ59EK9 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.6■□□□□ 0.73
RUNDC3AQ59EK9 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RUNDC3AQ59EK9 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RUNDC3AQ59EK9 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.6■□□□□ 0.73
RUNDC3AQ59EK9 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RUNDC3AQ59EK9 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RUNDC3AQ59EK9 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.6■□□□□ 0.73
RUNDC3AQ59EK9 AC105233.4-201ENST00000642045 216 ntBASIC19.6■□□□□ 0.73
RUNDC3AQ59EK9 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
RUNDC3AQ59EK9 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.6■□□□□ 0.73
RUNDC3AQ59EK9 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RUNDC3AQ59EK9 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.6■□□□□ 0.73
RUNDC3AQ59EK9 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RUNDC3AQ59EK9 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
RUNDC3AQ59EK9 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RUNDC3AQ59EK9 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.6■□□□□ 0.73
RUNDC3AQ59EK9 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RUNDC3AQ59EK9 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RUNDC3AQ59EK9 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.59■□□□□ 0.73
RUNDC3AQ59EK9 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RUNDC3AQ59EK9 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RUNDC3AQ59EK9 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RUNDC3AQ59EK9 AL391422.3-201ENST00000603791 2761 ntBASIC19.59■□□□□ 0.73
RUNDC3AQ59EK9 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RUNDC3AQ59EK9 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.59■□□□□ 0.73
RUNDC3AQ59EK9 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.59■□□□□ 0.73
RUNDC3AQ59EK9 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
RUNDC3AQ59EK9 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.59■□□□□ 0.73
RUNDC3AQ59EK9 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.59■□□□□ 0.73
RUNDC3AQ59EK9 AL136162.1-201ENST00000607711 1078 ntBASIC19.59■□□□□ 0.73
RUNDC3AQ59EK9 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RUNDC3AQ59EK9 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.59■□□□□ 0.73
RUNDC3AQ59EK9 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RUNDC3AQ59EK9 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
RUNDC3AQ59EK9 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.59■□□□□ 0.73
RUNDC3AQ59EK9 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
RUNDC3AQ59EK9 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RUNDC3AQ59EK9 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
RUNDC3AQ59EK9 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.58■□□□□ 0.73
RUNDC3AQ59EK9 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RUNDC3AQ59EK9 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RUNDC3AQ59EK9 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.58■□□□□ 0.73
RUNDC3AQ59EK9 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RUNDC3AQ59EK9 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RUNDC3AQ59EK9 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RUNDC3AQ59EK9 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.58■□□□□ 0.73
RUNDC3AQ59EK9 AL162377.1-201ENST00000618844 1793 ntBASIC19.58■□□□□ 0.73
RUNDC3AQ59EK9 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.58■□□□□ 0.73
RUNDC3AQ59EK9 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
RUNDC3AQ59EK9 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.58■□□□□ 0.72
RUNDC3AQ59EK9 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RUNDC3AQ59EK9 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.58■□□□□ 0.72
RUNDC3AQ59EK9 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RUNDC3AQ59EK9 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.58■□□□□ 0.72
RUNDC3AQ59EK9 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RUNDC3AQ59EK9 FP700111.2-201ENST00000619190 1892 ntBASIC19.58■□□□□ 0.72
RUNDC3AQ59EK9 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RUNDC3AQ59EK9 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
RUNDC3AQ59EK9 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
RUNDC3AQ59EK9 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms