Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC21■□□□□ 0.95
KHDC1Q4VXA5 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC21■□□□□ 0.95
KHDC1Q4VXA5 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21■□□□□ 0.95
KHDC1Q4VXA5 AC104187.1-201ENST00000607510 612 ntBASIC21■□□□□ 0.95
KHDC1Q4VXA5 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
KHDC1Q4VXA5 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
KHDC1Q4VXA5 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21■□□□□ 0.95
KHDC1Q4VXA5 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
KHDC1Q4VXA5 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
KHDC1Q4VXA5 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
KHDC1Q4VXA5 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
KHDC1Q4VXA5 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
KHDC1Q4VXA5 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.99■□□□□ 0.95
KHDC1Q4VXA5 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
KHDC1Q4VXA5 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
KHDC1Q4VXA5 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
KHDC1Q4VXA5 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20.99■□□□□ 0.95
KHDC1Q4VXA5 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
KHDC1Q4VXA5 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
KHDC1Q4VXA5 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.99■□□□□ 0.95
KHDC1Q4VXA5 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
KHDC1Q4VXA5 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
KHDC1Q4VXA5 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
KHDC1Q4VXA5 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.98■□□□□ 0.95
KHDC1Q4VXA5 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
KHDC1Q4VXA5 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
KHDC1Q4VXA5 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
KHDC1Q4VXA5 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
KHDC1Q4VXA5 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.98■□□□□ 0.95
KHDC1Q4VXA5 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.98■□□□□ 0.95
KHDC1Q4VXA5 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
KHDC1Q4VXA5 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.98■□□□□ 0.95
KHDC1Q4VXA5 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.98■□□□□ 0.95
KHDC1Q4VXA5 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.98■□□□□ 0.95
KHDC1Q4VXA5 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.98■□□□□ 0.95
KHDC1Q4VXA5 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.98■□□□□ 0.95
KHDC1Q4VXA5 EEF1DP3-203ENST00000566025 782 ntBASIC20.98■□□□□ 0.95
KHDC1Q4VXA5 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.98■□□□□ 0.95
KHDC1Q4VXA5 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.98■□□□□ 0.95
KHDC1Q4VXA5 AC022517.1-201ENST00000592429 346 ntBASIC20.98■□□□□ 0.95
KHDC1Q4VXA5 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
KHDC1Q4VXA5 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
KHDC1Q4VXA5 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
KHDC1Q4VXA5 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
KHDC1Q4VXA5 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
KHDC1Q4VXA5 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
KHDC1Q4VXA5 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
KHDC1Q4VXA5 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
KHDC1Q4VXA5 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
KHDC1Q4VXA5 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
KHDC1Q4VXA5 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
KHDC1Q4VXA5 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
KHDC1Q4VXA5 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
KHDC1Q4VXA5 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.97■□□□□ 0.95
KHDC1Q4VXA5 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.97■□□□□ 0.95
KHDC1Q4VXA5 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.97■□□□□ 0.95
KHDC1Q4VXA5 IKBKGP1-201ENST00000612193 1073 ntBASIC20.97■□□□□ 0.95
KHDC1Q4VXA5 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
KHDC1Q4VXA5 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
KHDC1Q4VXA5 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
KHDC1Q4VXA5 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
KHDC1Q4VXA5 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
KHDC1Q4VXA5 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
KHDC1Q4VXA5 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
KHDC1Q4VXA5 FEM1AP4-201ENST00000443167 1987 ntBASIC20.96■□□□□ 0.95
KHDC1Q4VXA5 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
KHDC1Q4VXA5 LINC01006-201ENST00000333319 2292 ntBASIC20.96■□□□□ 0.95
KHDC1Q4VXA5 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.96■□□□□ 0.95
KHDC1Q4VXA5 GXYLT1P2-201ENST00000433312 1230 ntBASIC20.96■□□□□ 0.95
KHDC1Q4VXA5 AC104564.3-201ENST00000582367 638 ntBASIC20.96■□□□□ 0.95
KHDC1Q4VXA5 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
KHDC1Q4VXA5 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
KHDC1Q4VXA5 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
KHDC1Q4VXA5 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
KHDC1Q4VXA5 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.95■□□□□ 0.94
KHDC1Q4VXA5 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
KHDC1Q4VXA5 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
KHDC1Q4VXA5 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
KHDC1Q4VXA5 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
KHDC1Q4VXA5 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
KHDC1Q4VXA5 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
KHDC1Q4VXA5 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
KHDC1Q4VXA5 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.95■□□□□ 0.94
KHDC1Q4VXA5 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.95■□□□□ 0.94
KHDC1Q4VXA5 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.95■□□□□ 0.94
KHDC1Q4VXA5 AC092437.1-201ENST00000624794 1048 ntBASIC20.95■□□□□ 0.94
KHDC1Q4VXA5 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
KHDC1Q4VXA5 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
KHDC1Q4VXA5 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.95■□□□□ 0.94
KHDC1Q4VXA5 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
KHDC1Q4VXA5 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
KHDC1Q4VXA5 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
KHDC1Q4VXA5 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
KHDC1Q4VXA5 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
KHDC1Q4VXA5 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.94■□□□□ 0.94
KHDC1Q4VXA5 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
KHDC1Q4VXA5 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.94■□□□□ 0.94
KHDC1Q4VXA5 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.94■□□□□ 0.94
KHDC1Q4VXA5 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC20.94■□□□□ 0.94
KHDC1Q4VXA5 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms