Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 ME3-201ENST00000323418 1068 ntTSL 5 BASIC21.91■■□□□ 1.1
PTPN20Q4JDL3 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.91■■□□□ 1.1
PTPN20Q4JDL3 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
PTPN20Q4JDL3 AC137761.2-201ENST00000561729 223 ntBASIC21.91■■□□□ 1.1
PTPN20Q4JDL3 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21.91■■□□□ 1.1
PTPN20Q4JDL3 AC145350.3-201ENST00000569033 163 ntBASIC21.91■■□□□ 1.1
PTPN20Q4JDL3 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC21.91■■□□□ 1.1
PTPN20Q4JDL3 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
PTPN20Q4JDL3 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC21.91■■□□□ 1.1
PTPN20Q4JDL3 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PTPN20Q4JDL3 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PTPN20Q4JDL3 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PTPN20Q4JDL3 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
PTPN20Q4JDL3 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PTPN20Q4JDL3 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
PTPN20Q4JDL3 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PTPN20Q4JDL3 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC21.9■■□□□ 1.1
PTPN20Q4JDL3 RBM17P2-201ENST00000616397 1405 ntBASIC21.9■■□□□ 1.1
PTPN20Q4JDL3 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PTPN20Q4JDL3 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
PTPN20Q4JDL3 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PTPN20Q4JDL3 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PTPN20Q4JDL3 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.9■■□□□ 1.1
PTPN20Q4JDL3 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC21.9■■□□□ 1.1
PTPN20Q4JDL3 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PTPN20Q4JDL3 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC21.9■■□□□ 1.1
PTPN20Q4JDL3 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
PTPN20Q4JDL3 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PTPN20Q4JDL3 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PTPN20Q4JDL3 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PTPN20Q4JDL3 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
PTPN20Q4JDL3 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PTPN20Q4JDL3 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.9■■□□□ 1.1
PTPN20Q4JDL3 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PTPN20Q4JDL3 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.9■■□□□ 1.1
PTPN20Q4JDL3 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC21.9■■□□□ 1.1
PTPN20Q4JDL3 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC21.9■■□□□ 1.1
PTPN20Q4JDL3 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC21.9■■□□□ 1.1
PTPN20Q4JDL3 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC21.89■■□□□ 1.1
PTPN20Q4JDL3 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.1
PTPN20Q4JDL3 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PTPN20Q4JDL3 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PTPN20Q4JDL3 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
PTPN20Q4JDL3 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
PTPN20Q4JDL3 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
PTPN20Q4JDL3 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.89■■□□□ 1.09
PTPN20Q4JDL3 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PTPN20Q4JDL3 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
PTPN20Q4JDL3 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PTPN20Q4JDL3 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PTPN20Q4JDL3 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PTPN20Q4JDL3 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PTPN20Q4JDL3 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PTPN20Q4JDL3 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC21.88■■□□□ 1.09
PTPN20Q4JDL3 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PTPN20Q4JDL3 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PTPN20Q4JDL3 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC21.88■■□□□ 1.09
PTPN20Q4JDL3 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PTPN20Q4JDL3 AC121338.2-201ENST00000622535 1744 ntBASIC21.88■■□□□ 1.09
PTPN20Q4JDL3 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC21.88■■□□□ 1.09
PTPN20Q4JDL3 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
PTPN20Q4JDL3 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
PTPN20Q4JDL3 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC21.87■■□□□ 1.09
PTPN20Q4JDL3 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
PTPN20Q4JDL3 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PTPN20Q4JDL3 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PTPN20Q4JDL3 AC006015.1-201ENST00000429970 570 ntBASIC21.87■■□□□ 1.09
PTPN20Q4JDL3 UQCRFS1P1-201ENST00000435169 820 ntBASIC21.87■■□□□ 1.09
PTPN20Q4JDL3 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC21.87■■□□□ 1.09
PTPN20Q4JDL3 SPI1-203ENST00000533030 661 ntTSL 2 BASIC21.87■■□□□ 1.09
PTPN20Q4JDL3 BRI3-207ENST00000539286 699 ntTSL 2 BASIC21.87■■□□□ 1.09
PTPN20Q4JDL3 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC21.87■■□□□ 1.09
PTPN20Q4JDL3 AC243732.1-201ENST00000612648 864 ntBASIC21.87■■□□□ 1.09
PTPN20Q4JDL3 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
PTPN20Q4JDL3 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
PTPN20Q4JDL3 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC21.87■■□□□ 1.09
PTPN20Q4JDL3 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PTPN20Q4JDL3 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
PTPN20Q4JDL3 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
PTPN20Q4JDL3 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
PTPN20Q4JDL3 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC21.86■■□□□ 1.09
PTPN20Q4JDL3 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
PTPN20Q4JDL3 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC21.86■■□□□ 1.09
PTPN20Q4JDL3 ERF-202ENST00000440177 2032 ntTSL 2 BASIC21.86■■□□□ 1.09
PTPN20Q4JDL3 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
PTPN20Q4JDL3 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
PTPN20Q4JDL3 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
PTPN20Q4JDL3 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC21.86■■□□□ 1.09
PTPN20Q4JDL3 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC21.86■■□□□ 1.09
PTPN20Q4JDL3 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
PTPN20Q4JDL3 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PTPN20Q4JDL3 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
PTPN20Q4JDL3 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
PTPN20Q4JDL3 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PTPN20Q4JDL3 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
PTPN20Q4JDL3 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
PTPN20Q4JDL3 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
PTPN20Q4JDL3 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.85■■□□□ 1.09
PTPN20Q4JDL3 AC022517.1-201ENST00000592429 346 ntBASIC21.85■■□□□ 1.09
PTPN20Q4JDL3 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.85■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms