Protein–RNA interactions for Protein: Q3KNV8

PCGF3, Polycomb group RING finger protein 3, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3Q3KNV8 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCGF3Q3KNV8 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.33■□□□□ 0.53
PCGF3Q3KNV8 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.53
PCGF3Q3KNV8 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.33■□□□□ 0.53
PCGF3Q3KNV8 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.33■□□□□ 0.53
PCGF3Q3KNV8 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PCGF3Q3KNV8 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PCGF3Q3KNV8 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC18.33■□□□□ 0.52
PCGF3Q3KNV8 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCGF3Q3KNV8 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCGF3Q3KNV8 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC18.33■□□□□ 0.52
PCGF3Q3KNV8 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC18.33■□□□□ 0.52
PCGF3Q3KNV8 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PCGF3Q3KNV8 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
PCGF3Q3KNV8 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCGF3Q3KNV8 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PCGF3Q3KNV8 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC18.33■□□□□ 0.52
PCGF3Q3KNV8 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCGF3Q3KNV8 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
PCGF3Q3KNV8 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
PCGF3Q3KNV8 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
PCGF3Q3KNV8 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCGF3Q3KNV8 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCGF3Q3KNV8 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCGF3Q3KNV8 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.32■□□□□ 0.52
PCGF3Q3KNV8 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCGF3Q3KNV8 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCGF3Q3KNV8 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCGF3Q3KNV8 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.32■□□□□ 0.52
PCGF3Q3KNV8 DUX4L2-201ENST00000561772 1275 ntBASIC18.32■□□□□ 0.52
PCGF3Q3KNV8 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC18.32■□□□□ 0.52
PCGF3Q3KNV8 DUX4L6-201ENST00000626483 1275 ntBASIC18.32■□□□□ 0.52
PCGF3Q3KNV8 DUX4L1-201ENST00000627662 1275 ntBASIC18.32■□□□□ 0.52
PCGF3Q3KNV8 DUX4L8-201ENST00000629013 1275 ntBASIC18.32■□□□□ 0.52
PCGF3Q3KNV8 DUX4L3-201ENST00000630187 1275 ntBASIC18.32■□□□□ 0.52
PCGF3Q3KNV8 DUX4L7-201ENST00000630678 1275 ntBASIC18.32■□□□□ 0.52
PCGF3Q3KNV8 DUX4L5-201ENST00000630834 1275 ntBASIC18.32■□□□□ 0.52
PCGF3Q3KNV8 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.32■□□□□ 0.52
PCGF3Q3KNV8 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCGF3Q3KNV8 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCGF3Q3KNV8 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCGF3Q3KNV8 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
PCGF3Q3KNV8 ASL-203ENST00000380839 1765 ntTSL 5 BASIC18.32■□□□□ 0.52
PCGF3Q3KNV8 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
PCGF3Q3KNV8 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCGF3Q3KNV8 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCGF3Q3KNV8 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
PCGF3Q3KNV8 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCGF3Q3KNV8 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC18.31■□□□□ 0.52
PCGF3Q3KNV8 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.31■□□□□ 0.52
PCGF3Q3KNV8 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCGF3Q3KNV8 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.31■□□□□ 0.52
PCGF3Q3KNV8 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCGF3Q3KNV8 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC18.31■□□□□ 0.52
PCGF3Q3KNV8 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCGF3Q3KNV8 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCGF3Q3KNV8 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC18.31■□□□□ 0.52
PCGF3Q3KNV8 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCGF3Q3KNV8 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCGF3Q3KNV8 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC18.31■□□□□ 0.52
PCGF3Q3KNV8 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCGF3Q3KNV8 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.3■□□□□ 0.52
PCGF3Q3KNV8 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PCGF3Q3KNV8 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.3■□□□□ 0.52
PCGF3Q3KNV8 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC18.3■□□□□ 0.52
PCGF3Q3KNV8 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCGF3Q3KNV8 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC18.3■□□□□ 0.52
PCGF3Q3KNV8 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PCGF3Q3KNV8 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC18.3■□□□□ 0.52
PCGF3Q3KNV8 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC18.3■□□□□ 0.52
PCGF3Q3KNV8 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PCGF3Q3KNV8 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC18.3■□□□□ 0.52
PCGF3Q3KNV8 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
PCGF3Q3KNV8 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
PCGF3Q3KNV8 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCGF3Q3KNV8 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PCGF3Q3KNV8 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PCGF3Q3KNV8 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.29■□□□□ 0.52
PCGF3Q3KNV8 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.29■□□□□ 0.52
PCGF3Q3KNV8 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.29■□□□□ 0.52
PCGF3Q3KNV8 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCGF3Q3KNV8 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCGF3Q3KNV8 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCGF3Q3KNV8 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCGF3Q3KNV8 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PCGF3Q3KNV8 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCGF3Q3KNV8 HACD1-201ENST00000326961 773 ntTSL 2 BASIC18.29■□□□□ 0.52
PCGF3Q3KNV8 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC18.29■□□□□ 0.52
PCGF3Q3KNV8 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PCGF3Q3KNV8 GLI3-203ENST00000437480 451 ntTSL 2 BASIC18.29■□□□□ 0.52
PCGF3Q3KNV8 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC18.29■□□□□ 0.52
PCGF3Q3KNV8 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PCGF3Q3KNV8 CPT2-209ENST00000636935 803 ntTSL 5 BASIC18.29■□□□□ 0.52
PCGF3Q3KNV8 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCGF3Q3KNV8 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
PCGF3Q3KNV8 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC18.29■□□□□ 0.52
PCGF3Q3KNV8 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC18.29■□□□□ 0.52
PCGF3Q3KNV8 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PCGF3Q3KNV8 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.29■□□□□ 0.52
PCGF3Q3KNV8 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms