Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC37.17■■■■□ 3.54
HMGXB3Q12766 AL023875.1-201ENST00000640777 796 ntBASIC37.17■■■■□ 3.54
HMGXB3Q12766 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC37.17■■■■□ 3.54
HMGXB3Q12766 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC37.17■■■■□ 3.54
HMGXB3Q12766 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC37.17■■■■□ 3.54
HMGXB3Q12766 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC37.17■■■■□ 3.54
HMGXB3Q12766 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC37.17■■■■□ 3.54
HMGXB3Q12766 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC37.17■■■■□ 3.54
HMGXB3Q12766 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC37.17■■■■□ 3.54
HMGXB3Q12766 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC37.16■■■■□ 3.54
HMGXB3Q12766 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC37.16■■■■□ 3.54
HMGXB3Q12766 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC37.16■■■■□ 3.54
HMGXB3Q12766 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC37.16■■■■□ 3.54
HMGXB3Q12766 NXN-202ENST00000537628 1340 ntTSL 3 BASIC37.16■■■■□ 3.54
HMGXB3Q12766 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC37.16■■■■□ 3.54
HMGXB3Q12766 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC37.16■■■■□ 3.54
HMGXB3Q12766 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC37.16■■■■□ 3.54
HMGXB3Q12766 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC37.15■■■■□ 3.54
HMGXB3Q12766 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC37.15■■■■□ 3.54
HMGXB3Q12766 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC37.15■■■■□ 3.54
HMGXB3Q12766 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC37.15■■■■□ 3.54
HMGXB3Q12766 AC110285.5-201ENST00000611501 352 ntBASIC37.15■■■■□ 3.54
HMGXB3Q12766 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC37.15■■■■□ 3.54
HMGXB3Q12766 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC37.15■■■■□ 3.54
HMGXB3Q12766 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC37.15■■■■□ 3.54
HMGXB3Q12766 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC37.15■■■■□ 3.54
HMGXB3Q12766 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC37.15■■■■□ 3.54
HMGXB3Q12766 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC37.15■■■■□ 3.54
HMGXB3Q12766 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC37.15■■■■□ 3.54
HMGXB3Q12766 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC37.14■■■■□ 3.54
HMGXB3Q12766 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC37.14■■■■□ 3.54
HMGXB3Q12766 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC37.14■■■■□ 3.54
HMGXB3Q12766 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC37.14■■■■□ 3.54
HMGXB3Q12766 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC37.14■■■■□ 3.54
HMGXB3Q12766 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC37.14■■■■□ 3.54
HMGXB3Q12766 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC37.14■■■■□ 3.54
HMGXB3Q12766 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC37.14■■■■□ 3.54
HMGXB3Q12766 TK2-204ENST00000525974 1178 ntTSL 2 BASIC37.14■■■■□ 3.54
HMGXB3Q12766 GRAP-204ENST00000573099 846 ntTSL 3 BASIC37.14■■■■□ 3.54
HMGXB3Q12766 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC37.13■■■■□ 3.53
HMGXB3Q12766 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC37.13■■■■□ 3.53
HMGXB3Q12766 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC37.13■■■■□ 3.53
HMGXB3Q12766 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC37.13■■■■□ 3.53
HMGXB3Q12766 KRASP1-201ENST00000407852 552 ntBASIC37.13■■■■□ 3.53
HMGXB3Q12766 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC37.13■■■■□ 3.53
HMGXB3Q12766 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC37.13■■■■□ 3.53
HMGXB3Q12766 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC37.13■■■■□ 3.53
HMGXB3Q12766 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC37.13■■■■□ 3.53
HMGXB3Q12766 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC37.13■■■■□ 3.53
HMGXB3Q12766 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC37.13■■■■□ 3.53
HMGXB3Q12766 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC37.12■■■■□ 3.53
HMGXB3Q12766 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC37.12■■■■□ 3.53
HMGXB3Q12766 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC37.12■■■■□ 3.53
HMGXB3Q12766 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC37.12■■■■□ 3.53
HMGXB3Q12766 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC37.12■■■■□ 3.53
HMGXB3Q12766 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC37.12■■■■□ 3.53
HMGXB3Q12766 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC37.12■■■■□ 3.53
HMGXB3Q12766 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC37.11■■■■□ 3.53
HMGXB3Q12766 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC37.11■■■■□ 3.53
HMGXB3Q12766 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC37.11■■■■□ 3.53
HMGXB3Q12766 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC37.11■■■■□ 3.53
HMGXB3Q12766 PRKY-204ENST00000533551 1019 ntBASIC37.11■■■■□ 3.53
HMGXB3Q12766 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC37.11■■■■□ 3.53
HMGXB3Q12766 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC37.11■■■■□ 3.53
HMGXB3Q12766 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC37.11■■■■□ 3.53
HMGXB3Q12766 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC37.11■■■■□ 3.53
HMGXB3Q12766 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC37.11■■■■□ 3.53
HMGXB3Q12766 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC37.11■■■■□ 3.53
HMGXB3Q12766 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC37.11■■■■□ 3.53
HMGXB3Q12766 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC37.1■■■■□ 3.53
HMGXB3Q12766 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC37.1■■■■□ 3.53
HMGXB3Q12766 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC37.1■■■■□ 3.53
HMGXB3Q12766 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC37.1■■■■□ 3.53
HMGXB3Q12766 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC37.1■■■■□ 3.53
HMGXB3Q12766 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC37.1■■■■□ 3.53
HMGXB3Q12766 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC37.1■■■■□ 3.53
HMGXB3Q12766 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC37.1■■■■□ 3.53
HMGXB3Q12766 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC37.1■■■■□ 3.53
HMGXB3Q12766 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC37.1■■■■□ 3.53
HMGXB3Q12766 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC37.1■■■■□ 3.53
HMGXB3Q12766 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC37.1■■■■□ 3.53
HMGXB3Q12766 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC37.1■■■■□ 3.53
HMGXB3Q12766 AC139530.1-201ENST00000575312 1977 ntBASIC37.1■■■■□ 3.53
HMGXB3Q12766 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC37.1■■■■□ 3.53
HMGXB3Q12766 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC37.09■■■■□ 3.53
HMGXB3Q12766 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC37.09■■■■□ 3.53
HMGXB3Q12766 GGT1-206ENST00000404223 952 ntTSL 2 BASIC37.09■■■■□ 3.53
HMGXB3Q12766 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC37.09■■■■□ 3.53
HMGXB3Q12766 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC37.09■■■■□ 3.53
HMGXB3Q12766 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC37.09■■■■□ 3.53
HMGXB3Q12766 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC37.09■■■■□ 3.53
HMGXB3Q12766 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC37.08■■■■□ 3.53
HMGXB3Q12766 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC37.08■■■■□ 3.53
HMGXB3Q12766 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC37.08■■■■□ 3.53
HMGXB3Q12766 PREB-202ENST00000406567 1910 ntTSL 5 BASIC37.08■■■■□ 3.53
HMGXB3Q12766 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC37.08■■■■□ 3.53
HMGXB3Q12766 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC37.07■■■■□ 3.53
HMGXB3Q12766 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC37.07■■■■□ 3.53
HMGXB3Q12766 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC37.07■■■■□ 3.53
HMGXB3Q12766 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC37.07■■■■□ 3.52
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms