Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 ILF3-222ENST00000592763 3866 ntTSL 5 BASIC8.51□□□□□ -1.052e-10■■■□□ 16.4
SRSF1Q07955 ILF3-211ENST00000589052 637 ntTSL 58.47□□□□□ -1.058e-12■■■□□ 16.4
SRSF1Q07955 ZNF44-206ENST00000483826 556 ntTSL 214.51□□□□□ -0.096e-8■■■□□ 16.4
SRSF1Q07955 ZNF44-201ENST00000354656 517 ntTSL 311.73□□□□□ -0.536e-8■■■□□ 16.4
SRSF1Q07955 ZNF44-205ENST00000397742 2372 ntTSL 211.25□□□□□ -0.616e-8■■■□□ 16.4
SRSF1Q07955 ZNF44-202ENST00000355684 2119 ntAPPRIS P3 TSL 2 BASIC10.73□□□□□ -0.696e-8■■■□□ 16.4
SRSF1Q07955 ZNF44-208ENST00000600003 2051 ntTSL 210.11□□□□□ -0.796e-8■■■□□ 16.4
SRSF1Q07955 ZNF44-203ENST00000356109 2706 ntAPPRIS ALT2 TSL 2 BASIC8.82□□□□□ -16e-8■■■□□ 16.4
SRSF1Q07955 ZNF44-204ENST00000393337 3236 ntTSL 1 (best)7.32□□□□□ -1.246e-8■■■□□ 16.4
SRSF1Q07955 ACBD3-202ENST00000464927 294 ntTSL 22.67□□□□□ -1.985e-9■■■□□ 16.4
SRSF1Q07955 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.74e-6■■■□□ 16.4
SRSF1Q07955 OSBP-203ENST00000528903 873 ntTSL 27.85□□□□□ -1.154e-6■■■□□ 16.4
SRSF1Q07955 OSBP-202ENST00000525357 991 ntTSL 1 (best)4.66□□□□□ -1.664e-6■■■□□ 16.4
SRSF1Q07955 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC19.19■□□□□ 0.661e-6■■■□□ 16.4
SRSF1Q07955 ASMTL-AS1-204ENST00000443929 574 ntTSL 215.39■□□□□ 0.051e-6■■■□□ 16.4
SRSF1Q07955 SBF1-207ENST00000476293 399 ntTSL 313.97□□□□□ -0.175e-10■■■□□ 16.4
SRSF1Q07955 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.395e-10■■■□□ 16.4
SRSF1Q07955 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.495e-10■■■□□ 16.4
SRSF1Q07955 TCIRG1-206ENST00000527530 529 ntTSL 317.98■□□□□ 0.473e-6■■■□□ 16.4
SRSF1Q07955 TCIRG1-208ENST00000529364 868 ntTSL 314.72□□□□□ -0.053e-6■■■□□ 16.4
SRSF1Q07955 NISCH-209ENST00000485765 563 ntTSL 417.73■□□□□ 0.437e-7■■■□□ 16.4
SRSF1Q07955 CCDC136-208ENST00000472049 253 ntAPPRIS ALT2 TSL 322.59■■□□□ 1.212e-8■■■□□ 16.4
SRSF1Q07955 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.633e-7■■■□□ 16.4
SRSF1Q07955 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.533e-7■■■□□ 16.4
SRSF1Q07955 SLC43A3-217ENST00000530005 1434 ntTSL 1 (best)18.09■□□□□ 0.495e-7■■■□□ 16.4
SRSF1Q07955 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.413e-7■■■□□ 16.4
SRSF1Q07955 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.285e-7■■■□□ 16.4
SRSF1Q07955 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.355e-7■■■□□ 16.4
SRSF1Q07955 IMMP2L-210ENST00000492938 587 ntTSL 311.92□□□□□ -0.53e-7■■■□□ 16.4
SRSF1Q07955 HDAC1-208ENST00000482310 779 ntTSL 511.84□□□□□ -0.512e-6■■■□□ 16.4
SRSF1Q07955 IMMP2L-204ENST00000447215 1164 ntTSL 3 BASIC11.25□□□□□ -0.613e-7■■■□□ 16.4
SRSF1Q07955 HDAC1-210ENST00000490081 1047 ntTSL 311.16□□□□□ -0.622e-6■■■□□ 16.4
SRSF1Q07955 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC11.01□□□□□ -0.655e-7■■■□□ 16.4
SRSF1Q07955 SUN1-224ENST00000463848 659 ntTSL 410.98□□□□□ -0.652e-8■■■□□ 16.4
SRSF1Q07955 PTPRVP-205ENST00000641549 5067 ntBASIC10.96□□□□□ -0.662e-8■■■□□ 16.4
SRSF1Q07955 IMMP2L-206ENST00000452753 421 ntTSL 510.21□□□□□ -0.773e-7■■■□□ 16.4
SRSF1Q07955 SLC43A3-202ENST00000395123 2619 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.915e-7■■■□□ 16.4
SRSF1Q07955 SLC43A3-201ENST00000352187 2595 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.955e-7■■■□□ 16.4
SRSF1Q07955 AC139769.1-201ENST00000471224 1001 ntTSL 3 BASIC8.89□□□□□ -0.992e-8■■■□□ 16.4
SRSF1Q07955 PTPRVP-201ENST00000482597 3999 ntTSL 1 (best) BASIC7.36□□□□□ -1.232e-8■■■□□ 16.4
SRSF1Q07955 AC139769.1-203ENST00000462186 1330 ntTSL 36.42□□□□□ -1.382e-8■■■□□ 16.4
SRSF1Q07955 AC139769.1-202ENST00000475499 723 ntTSL 34.86□□□□□ -1.632e-8■■■□□ 16.4
SRSF1Q07955 AC139769.1-204ENST00000472297 1931 ntBASIC3.73□□□□□ -1.812e-8■■■□□ 16.4
SRSF1Q07955 RBMX-209ENST00000565438 1292 ntTSL 5 BASIC11.99□□□□□ -0.494e-11■■■□□ 16.4
SRSF1Q07955 RBMX-208ENST00000563370 577 ntTSL 311.43□□□□□ -0.584e-11■■■□□ 16.4
SRSF1Q07955 RBMX-211ENST00000567262 477 ntTSL 511.43□□□□□ -0.584e-11■■■□□ 16.4
SRSF1Q07955 RBMX-204ENST00000464781 1852 ntTSL 211.31□□□□□ -0.64e-11■■■□□ 16.4
SRSF1Q07955 RBMX-201ENST00000320676 2012 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.884e-11■■■□□ 16.4
SRSF1Q07955 RBMX-207ENST00000562646 2148 ntTSL 1 (best) BASIC9.07□□□□□ -0.964e-11■■■□□ 16.4
SRSF1Q07955 TACC3-204ENST00000466077 583 ntTSL 215.42■□□□□ 0.063e-6■■■□□ 16.4
SRSF1Q07955 CYTH1-216ENST00000591574 1043 ntTSL 323.36■■□□□ 1.332e-11■■■□□ 16.4
SRSF1Q07955 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC14.71□□□□□ -0.052e-11■■■□□ 16.4
SRSF1Q07955 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.392e-11■■■□□ 16.4
SRSF1Q07955 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.392e-11■■■□□ 16.4
SRSF1Q07955 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC10.39□□□□□ -0.752e-11■■■□□ 16.4
SRSF1Q07955 CYTH1-217ENST00000592497 454 ntTSL 37.85□□□□□ -1.152e-11■■■□□ 16.4
SRSF1Q07955 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.629e-7■■■□□ 16.4
SRSF1Q07955 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC14.49□□□□□ -0.099e-7■■■□□ 16.4
SRSF1Q07955 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC12.87□□□□□ -0.359e-7■■■□□ 16.4
SRSF1Q07955 THAP4-203ENST00000402545 833 ntTSL 5 BASIC12.65□□□□□ -0.389e-7■■■□□ 16.4
SRSF1Q07955 RB1CC1-206ENST00000518710 711 ntTSL 322.99■■□□□ 1.272e-6■■■□□ 16.4
SRSF1Q07955 RB1CC1-208ENST00000521611 528 ntTSL 522.69■■□□□ 1.222e-6■■■□□ 16.4
SRSF1Q07955 EEF1A1-205ENST00000455918 701 ntTSL 220.03■□□□□ 0.85e-13■■■□□ 16.4
SRSF1Q07955 RB1CC1-204ENST00000518211 891 ntTSL 518.59■□□□□ 0.572e-6■■■□□ 16.4
SRSF1Q07955 RB1CC1-203ENST00000517963 551 ntTSL 417.07■□□□□ 0.322e-6■■■□□ 16.4
SRSF1Q07955 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.055e-13■■■□□ 16.4
SRSF1Q07955 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.173e-6■■■□□ 16.4
SRSF1Q07955 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.282e-6■■■□□ 16.4
SRSF1Q07955 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.342e-6■■■□□ 16.4
SRSF1Q07955 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.515e-13■■■□□ 16.4
SRSF1Q07955 EEF1A1-201ENST00000309268 2303 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.85e-13■■■□□ 16.4
SRSF1Q07955 EEF1A1-204ENST00000356303 635 ntTSL 28.87□□□□□ -0.995e-13■■■□□ 16.4
SRSF1Q07955 PAN2-221ENST00000610546 5301 ntAPPRIS ALT1 TSL 5 BASIC8.26□□□□□ -1.092e-6■■■□□ 16.4
SRSF1Q07955 PAN2-203ENST00000440411 4576 ntAPPRIS P3 TSL 1 (best) BASIC8.01□□□□□ -1.132e-6■■■□□ 16.4
SRSF1Q07955 PAN2-205ENST00000547226 2642 ntTSL 57.78□□□□□ -1.162e-6■■■□□ 16.4
SRSF1Q07955 PAN2-202ENST00000425394 5372 ntAPPRIS ALT1 TSL 1 (best) BASIC7.77□□□□□ -1.172e-6■■■□□ 16.4
SRSF1Q07955 PAN2-209ENST00000548043 4641 ntAPPRIS ALT1 TSL 5 BASIC7.71□□□□□ -1.182e-6■■■□□ 16.4
SRSF1Q07955 PAN2-201ENST00000257931 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC7.35□□□□□ -1.232e-6■■■□□ 16.4
SRSF1Q07955 SEL1L3-201ENST00000264868 4369 ntTSL 1 (best) BASIC6.68□□□□□ -1.343e-6■■■□□ 16.4
SRSF1Q07955 PAN2-217ENST00000551359 4685 ntTSL 56.38□□□□□ -1.392e-6■■■□□ 16.4
SRSF1Q07955 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC5.07□□□□□ -1.63e-6■■■□□ 16.4
SRSF1Q07955 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.25□□□□□ -1.735e-13■■■□□ 16.4
SRSF1Q07955 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC3.84□□□□□ -1.795e-13■■■□□ 16.4
SRSF1Q07955 RB1CC1-205ENST00000518468 507 ntTSL 33.77□□□□□ -1.812e-6■■■□□ 16.4
SRSF1Q07955 BRWD1-214ENST00000484090 429 ntTSL 221.43■■□□□ 1.021e-6■■■□□ 16.4
SRSF1Q07955 USP48-210ENST00000489108 443 ntTSL 216.71■□□□□ 0.272e-9■■■□□ 16.4
SRSF1Q07955 FERMT2-214ENST00000557562 555 ntTSL 322.79■■□□□ 1.241e-6■■■□□ 16.4
SRSF1Q07955 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC14.64□□□□□ -0.073e-7■■■□□ 16.4
SRSF1Q07955 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.143e-7■■■□□ 16.4
SRSF1Q07955 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC13.95□□□□□ -0.181e-6■■■□□ 16.4
SRSF1Q07955 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.291e-6■■■□□ 16.4
SRSF1Q07955 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.313e-7■■■□□ 16.4
SRSF1Q07955 FERMT2-202ENST00000343279 3247 ntTSL 5 BASIC9.96□□□□□ -0.811e-6■■■□□ 16.4
SRSF1Q07955 FERMT2-201ENST00000341590 3338 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.821e-6■■■□□ 16.4
SRSF1Q07955 FERMT2-210ENST00000554712 587 ntTSL 39.68□□□□□ -0.861e-6■■■□□ 16.4
SRSF1Q07955 FERMT2-205ENST00000553373 2064 ntTSL 1 (best) BASIC9.47□□□□□ -0.891e-6■■■□□ 16.4
SRSF1Q07955 WDR6-216ENST00000489684 1155 ntTSL 215.07■□□□□ 02e-6■■■□□ 16.4
SRSF1Q07955 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC12.93□□□□□ -0.342e-6■■■□□ 16.4
SRSF1Q07955 WDR6-201ENST00000395474 4401 ntTSL 1 (best) BASIC10.34□□□□□ -0.752e-6■■■□□ 16.4
SRSF1Q07955 WDR6-211ENST00000471162 3565 ntTSL 1 (best)10.08□□□□□ -0.82e-6■■■□□ 16.4
Retrieved 100 of 14,836 protein–RNA pairs in 106.8 ms