Protein–RNA interactions for Protein: Q02260

SMD1, Small nuclear ribonucleoprotein Sm D1, yeastyeast

Predicted RBP Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SMD1Q02260 YCR085WYCR085W 354 nt2.17□□□□□ -2.06
SMD1Q02260 BSC1YDL037C 987 nt2.17□□□□□ -2.06
SMD1Q02260 PBP4YDL053C 558 nt2.17□□□□□ -2.06
SMD1Q02260 HPA3YEL066W 540 nt2.17□□□□□ -2.06
SMD1Q02260 YHR214C-DYHR214C-D 294 nt2.17□□□□□ -2.06
SMD1Q02260 YIR020C-BYIR020C-B 735 nt2.17□□□□□ -2.06
SMD1Q02260 YAR069CYAR069C 294 nt2.17□□□□□ -2.06
SMD1Q02260 VMA6YLR447C 1038 nt2.17□□□□□ -2.06
SMD1Q02260 YMR122W-AYMR122W-A 255 nt2.17□□□□□ -2.06
SMD1Q02260 RPS16AYMR143W 432 nt2.17□□□□□ -2.06
SMD1Q02260 YNL043CYNL043C 321 nt2.17□□□□□ -2.06
SMD1Q02260 YNR025CYNR025C 360 nt2.17□□□□□ -2.06
SMD1Q02260 RPL20BYOR312C 519 nt2.17□□□□□ -2.06
SMD1Q02260 YBR051WYBR051W 351 nt2.17□□□□□ -2.06
SMD1Q02260 NIP7YPL211W 546 nt2.17□□□□□ -2.06
SMD1Q02260 PSY2YNL201C 2577 nt2.17□□□□□ -2.06
SMD1Q02260 INP52YNL106C 3552 nt2.17□□□□□ -2.06
SMD1Q02260 UTP14YML093W 2700 nt2.17□□□□□ -2.06
SMD1Q02260 ASI3YNL008C 2031 nt2.17□□□□□ -2.06
SMD1Q02260 PCI8YIL071C 1335 nt2.17□□□□□ -2.06
SMD1Q02260 DSE4YNR067C 3354 nt2.16□□□□□ -2.06
SMD1Q02260 KIN82YCR091W 2163 nt2.16□□□□□ -2.06
SMD1Q02260 URB2YJR041C 3525 nt2.16□□□□□ -2.06
SMD1Q02260 TRA1YHR099W 11235 nt2.16□□□□□ -2.06
SMD1Q02260 YKL100CYKL100C 1764 nt2.16□□□□□ -2.06
SMD1Q02260 STI1YOR027W 1770 nt2.16□□□□□ -2.06
SMD1Q02260 TMA64YDR117C 1698 nt2.16□□□□□ -2.06
SMD1Q02260 YNL193WYNL193W 1677 nt2.16□□□□□ -2.06
SMD1Q02260 snR5snR5 204 nt2.16□□□□□ -2.06
SMD1Q02260 YDL163WYDL163W 303 nt2.16□□□□□ -2.06
SMD1Q02260 MRH1YDR033W 963 nt2.16□□□□□ -2.06
SMD1Q02260 YFL012W-AYFL012W-A 375 nt2.16□□□□□ -2.06
SMD1Q02260 RPL27AYHR010W 411 nt2.16□□□□□ -2.06
SMD1Q02260 CWC24YLR323C 780 nt2.16□□□□□ -2.06
SMD1Q02260 YNL235CYNL235C 432 nt2.16□□□□□ -2.06
SMD1Q02260 YBR062CYBR062C 543 nt2.16□□□□□ -2.06
SMD1Q02260 CYR1YJL005W 6081 nt2.16□□□□□ -2.06
SMD1Q02260 SAP1YER047C 2694 nt2.16□□□□□ -2.06
SMD1Q02260 AI2Q0055 2565 nt2.16□□□□□ -2.06
SMD1Q02260 MED1YPR070W 1701 nt2.16□□□□□ -2.06
SMD1Q02260 BIT61YJL058C 1632 nt2.16□□□□□ -2.06
SMD1Q02260 YJL132WYJL132W 2253 nt2.16□□□□□ -2.06
SMD1Q02260 MAL33YBR297W 1407 nt2.16□□□□□ -2.06
SMD1Q02260 JJJ1YNL227C 1773 nt2.15□□□□□ -2.06
SMD1Q02260 VPS30YPL120W 1674 nt2.15□□□□□ -2.06
SMD1Q02260 CWC22YGR278W 1734 nt2.15□□□□□ -2.07
SMD1Q02260 YDR338CYDR338C 2088 nt2.15□□□□□ -2.07
SMD1Q02260 YER091C-AYER091C-A 222 nt2.15□□□□□ -2.07
SMD1Q02260 Q0144Q0144 330 nt2.15□□□□□ -2.07
SMD1Q02260 RPL17BYJL177W 555 nt2.15□□□□□ -2.07
SMD1Q02260 DAD2YKR083C 402 nt2.15□□□□□ -2.07
SMD1Q02260 ERG29YMR134W 714 nt2.15□□□□□ -2.07
SMD1Q02260 YMR181CYMR181C 465 nt2.15□□□□□ -2.07
SMD1Q02260 YMR254CYMR254C 309 nt2.15□□□□□ -2.07
SMD1Q02260 RPL16BYNL069C 597 nt2.15□□□□□ -2.07
SMD1Q02260 NGL1YOL042W 1092 nt2.15□□□□□ -2.07
SMD1Q02260 YPR147CYPR147C 915 nt2.15□□□□□ -2.07
SMD1Q02260 FKH2YNL068C 2589 nt2.15□□□□□ -2.07
SMD1Q02260 VHR2YER064C 1518 nt2.15□□□□□ -2.07
SMD1Q02260 SHQ1YIL104C 1524 nt2.15□□□□□ -2.07
SMD1Q02260 15S_rRNA15S_rRNA 1649 nt2.14□□□□□ -2.07
SMD1Q02260 BOI1YBL085W 2943 nt2.14□□□□□ -2.07
SMD1Q02260 YCR090CYCR090C 549 nt2.14□□□□□ -2.07
SMD1Q02260 PRP21YJL203W 843 nt2.14□□□□□ -2.07
SMD1Q02260 AIM36YMR157C 768 nt2.14□□□□□ -2.07
SMD1Q02260 IMP4YNL075W 873 nt2.14□□□□□ -2.07
SMD1Q02260 HEM4YOR278W 828 nt2.14□□□□□ -2.07
SMD1Q02260 SHS1YDL225W 1656 nt2.14□□□□□ -2.07
SMD1Q02260 PCK1YKR097W 1650 nt2.14□□□□□ -2.07
SMD1Q02260 YFL002W-BYFL002W-B 1317 nt2.14□□□□□ -2.07
SMD1Q02260 YGR161W-AYGR161W-A 1317 nt2.14□□□□□ -2.07
SMD1Q02260 YBL100W-AYBL100W-A 1317 nt2.14□□□□□ -2.07
SMD1Q02260 YCL020WYCL020W 1317 nt2.14□□□□□ -2.07
SMD1Q02260 YCK2YNL154C 1641 nt2.13□□□□□ -2.07
SMD1Q02260 SLP1YOR154W 1764 nt2.13□□□□□ -2.07
SMD1Q02260 UTP15YMR093W 1542 nt2.13□□□□□ -2.07
SMD1Q02260 NUM1YDR150W 8247 nt2.13□□□□□ -2.07
SMD1Q02260 MST27YGL051W 705 nt2.13□□□□□ -2.07
SMD1Q02260 YGR053CYGR053C 852 nt2.13□□□□□ -2.07
SMD1Q02260 BAT1YHR208W 1182 nt2.13□□□□□ -2.07
SMD1Q02260 YHR213WYHR213W 597 nt2.13□□□□□ -2.07
SMD1Q02260 TDA8YAL064C-A 381 nt2.13□□□□□ -2.07
SMD1Q02260 YAR062WYAR062W 597 nt2.13□□□□□ -2.07
SMD1Q02260 RPL6AYML073C 531 nt2.13□□□□□ -2.07
SMD1Q02260 SEC14YMR079W 915 nt2.13□□□□□ -2.07
SMD1Q02260 ATG3YNR007C 933 nt2.13□□□□□ -2.07
SMD1Q02260 TOR1YJR066W 7413 nt2.13□□□□□ -2.07
SMD1Q02260 ICR1ICR1 3199 nt2.13□□□□□ -2.07
SMD1Q02260 IRA2YOL081W 9240 nt2.13□□□□□ -2.07
SMD1Q02260 DSF2YBR007C 2211 nt2.13□□□□□ -2.07
SMD1Q02260 GEA1YJR031C 4227 nt2.12□□□□□ -2.07
SMD1Q02260 GCD6YDR211W 2139 nt2.12□□□□□ -2.07
SMD1Q02260 UBX3YDL091C 1368 nt2.12□□□□□ -2.07
SMD1Q02260 LRG1YDL240W 3054 nt2.12□□□□□ -2.07
SMD1Q02260 IKI3YLR384C 4050 nt2.12□□□□□ -2.07
SMD1Q02260 YDR239CYDR239C 2364 nt2.12□□□□□ -2.07
SMD1Q02260 YDR115WYDR115W 318 nt2.12□□□□□ -2.07
SMD1Q02260 TDA2YER071C 381 nt2.12□□□□□ -2.07
SMD1Q02260 YIP5YGL161C 933 nt2.12□□□□□ -2.07
SMD1Q02260 RSR1YGR152C 819 nt2.12□□□□□ -2.07
Retrieved 100 of 7,029 protein–RNA pairs in 21.2 ms