Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
H3F3AP84243 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
H3F3AP84243 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
H3F3AP84243 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.61■□□□□ 0.57
H3F3AP84243 MFSD11-216ENST00000590393 1141 ntBASIC18.61■□□□□ 0.57
H3F3AP84243 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.61■□□□□ 0.57
H3F3AP84243 IKBKGP1-201ENST00000612193 1073 ntBASIC18.61■□□□□ 0.57
H3F3AP84243 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.61■□□□□ 0.57
H3F3AP84243 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
H3F3AP84243 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
H3F3AP84243 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
H3F3AP84243 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
H3F3AP84243 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
H3F3AP84243 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
H3F3AP84243 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
H3F3AP84243 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
H3F3AP84243 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
H3F3AP84243 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.6■□□□□ 0.57
H3F3AP84243 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
H3F3AP84243 AC245052.3-201ENST00000450182 901 ntBASIC18.6■□□□□ 0.57
H3F3AP84243 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.6■□□□□ 0.57
H3F3AP84243 AC010536.3-201ENST00000620306 533 ntBASIC18.6■□□□□ 0.57
H3F3AP84243 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
H3F3AP84243 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
H3F3AP84243 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
H3F3AP84243 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
H3F3AP84243 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
H3F3AP84243 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
H3F3AP84243 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
H3F3AP84243 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC18.59■□□□□ 0.57
H3F3AP84243 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
H3F3AP84243 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
H3F3AP84243 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC18.59■□□□□ 0.57
H3F3AP84243 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.59■□□□□ 0.57
H3F3AP84243 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.59■□□□□ 0.57
H3F3AP84243 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.59■□□□□ 0.57
H3F3AP84243 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
H3F3AP84243 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.59■□□□□ 0.57
H3F3AP84243 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
H3F3AP84243 AC005229.4-201ENST00000610085 2198 ntBASIC18.59■□□□□ 0.57
H3F3AP84243 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
H3F3AP84243 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.59■□□□□ 0.57
H3F3AP84243 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
H3F3AP84243 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
H3F3AP84243 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
H3F3AP84243 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
H3F3AP84243 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
H3F3AP84243 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
H3F3AP84243 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
H3F3AP84243 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.58■□□□□ 0.57
H3F3AP84243 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
H3F3AP84243 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
H3F3AP84243 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
H3F3AP84243 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
H3F3AP84243 TERF1P5-201ENST00000477545 1207 ntBASIC18.58■□□□□ 0.56
H3F3AP84243 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.58■□□□□ 0.56
H3F3AP84243 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
H3F3AP84243 AC011767.1-201ENST00000617410 1153 ntBASIC18.58■□□□□ 0.56
H3F3AP84243 BID-214ENST00000617586 542 ntTSL 5 BASIC18.58■□□□□ 0.56
H3F3AP84243 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
H3F3AP84243 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
H3F3AP84243 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
H3F3AP84243 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
H3F3AP84243 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
H3F3AP84243 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.57■□□□□ 0.56
H3F3AP84243 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.57■□□□□ 0.56
H3F3AP84243 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
H3F3AP84243 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.57■□□□□ 0.56
H3F3AP84243 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
H3F3AP84243 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
H3F3AP84243 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
H3F3AP84243 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
H3F3AP84243 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.57■□□□□ 0.56
H3F3AP84243 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.57■□□□□ 0.56
H3F3AP84243 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
H3F3AP84243 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.57■□□□□ 0.56
H3F3AP84243 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
H3F3AP84243 DUX4L16-201ENST00000555130 1264 ntBASIC18.57■□□□□ 0.56
H3F3AP84243 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.57■□□□□ 0.56
H3F3AP84243 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
H3F3AP84243 AL137784.2-201ENST00000607332 1000 ntBASIC18.57■□□□□ 0.56
H3F3AP84243 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
H3F3AP84243 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.57■□□□□ 0.56
H3F3AP84243 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
H3F3AP84243 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC18.57■□□□□ 0.56
H3F3AP84243 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
H3F3AP84243 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
H3F3AP84243 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
H3F3AP84243 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.57■□□□□ 0.56
H3F3AP84243 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.57■□□□□ 0.56
H3F3AP84243 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
H3F3AP84243 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
H3F3AP84243 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
H3F3AP84243 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.56■□□□□ 0.56
H3F3AP84243 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
H3F3AP84243 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.56■□□□□ 0.56
H3F3AP84243 AC091799.1-201ENST00000422823 811 ntBASIC18.56■□□□□ 0.56
H3F3AP84243 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
H3F3AP84243 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.56■□□□□ 0.56
H3F3AP84243 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms