Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
AP1S1P61966 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
AP1S1P61966 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
AP1S1P61966 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
AP1S1P61966 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.98■□□□□ 0.95
AP1S1P61966 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.98■□□□□ 0.95
AP1S1P61966 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
AP1S1P61966 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
AP1S1P61966 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.98■□□□□ 0.95
AP1S1P61966 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
AP1S1P61966 AL049796.1-201ENST00000565336 1766 ntBASIC20.97■□□□□ 0.95
AP1S1P61966 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
AP1S1P61966 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
AP1S1P61966 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
AP1S1P61966 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
AP1S1P61966 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
AP1S1P61966 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
AP1S1P61966 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.97■□□□□ 0.95
AP1S1P61966 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
AP1S1P61966 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.97■□□□□ 0.95
AP1S1P61966 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.97■□□□□ 0.95
AP1S1P61966 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
AP1S1P61966 AC005181.1-201ENST00000604782 1256 ntBASIC20.97■□□□□ 0.95
AP1S1P61966 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
AP1S1P61966 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
AP1S1P61966 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
AP1S1P61966 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
AP1S1P61966 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
AP1S1P61966 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.97■□□□□ 0.95
AP1S1P61966 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.97■□□□□ 0.95
AP1S1P61966 AC068338.2-201ENST00000563278 1430 ntBASIC20.96■□□□□ 0.95
AP1S1P61966 AC026310.3-201ENST00000625186 2373 ntBASIC20.96■□□□□ 0.95
AP1S1P61966 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
AP1S1P61966 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
AP1S1P61966 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
AP1S1P61966 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
AP1S1P61966 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
AP1S1P61966 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
AP1S1P61966 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
AP1S1P61966 AC090192.1-201ENST00000517740 490 ntBASIC20.96■□□□□ 0.95
AP1S1P61966 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.96■□□□□ 0.95
AP1S1P61966 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.96■□□□□ 0.95
AP1S1P61966 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
AP1S1P61966 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
AP1S1P61966 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.96■□□□□ 0.95
AP1S1P61966 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
AP1S1P61966 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
AP1S1P61966 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.96■□□□□ 0.95
AP1S1P61966 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
AP1S1P61966 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.96■□□□□ 0.95
AP1S1P61966 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
AP1S1P61966 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.95■□□□□ 0.94
AP1S1P61966 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
AP1S1P61966 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
AP1S1P61966 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.95■□□□□ 0.94
AP1S1P61966 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
AP1S1P61966 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
AP1S1P61966 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.95■□□□□ 0.94
AP1S1P61966 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.95■□□□□ 0.94
AP1S1P61966 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.95■□□□□ 0.94
AP1S1P61966 CDV3P1-201ENST00000471403 739 ntBASIC20.95■□□□□ 0.94
AP1S1P61966 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
AP1S1P61966 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.95■□□□□ 0.94
AP1S1P61966 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
AP1S1P61966 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
AP1S1P61966 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
AP1S1P61966 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.94■□□□□ 0.94
AP1S1P61966 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
AP1S1P61966 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
AP1S1P61966 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
AP1S1P61966 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
AP1S1P61966 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.94■□□□□ 0.94
AP1S1P61966 MIR663A-201ENST00000385250 93 ntBASIC20.94■□□□□ 0.94
AP1S1P61966 CROCCP5-201ENST00000436658 830 ntBASIC20.94■□□□□ 0.94
AP1S1P61966 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.94■□□□□ 0.94
AP1S1P61966 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.94■□□□□ 0.94
AP1S1P61966 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
AP1S1P61966 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.94■□□□□ 0.94
AP1S1P61966 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.94■□□□□ 0.94
AP1S1P61966 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
AP1S1P61966 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
AP1S1P61966 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
AP1S1P61966 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
AP1S1P61966 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
AP1S1P61966 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.93■□□□□ 0.94
AP1S1P61966 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.93■□□□□ 0.94
AP1S1P61966 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
AP1S1P61966 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
AP1S1P61966 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
AP1S1P61966 CYP2T1P-201ENST00000432607 1285 ntBASIC20.93■□□□□ 0.94
AP1S1P61966 AC006970.2-201ENST00000450065 779 ntBASIC20.93■□□□□ 0.94
AP1S1P61966 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
AP1S1P61966 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
AP1S1P61966 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
AP1S1P61966 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
AP1S1P61966 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
AP1S1P61966 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
AP1S1P61966 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
AP1S1P61966 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
AP1S1P61966 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms