Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CXCR4P61073 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CXCR4P61073 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.93■□□□□ 0.62
CXCR4P61073 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CXCR4P61073 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CXCR4P61073 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CXCR4P61073 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC18.93■□□□□ 0.62
CXCR4P61073 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CXCR4P61073 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
CXCR4P61073 OR2I1P-207ENST00000453522 948 ntBASIC18.93■□□□□ 0.62
CXCR4P61073 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC18.93■□□□□ 0.62
CXCR4P61073 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC18.93■□□□□ 0.62
CXCR4P61073 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC18.93■□□□□ 0.62
CXCR4P61073 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC18.93■□□□□ 0.62
CXCR4P61073 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CXCR4P61073 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CXCR4P61073 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CXCR4P61073 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CXCR4P61073 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CXCR4P61073 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CXCR4P61073 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.92■□□□□ 0.62
CXCR4P61073 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.92■□□□□ 0.62
CXCR4P61073 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CXCR4P61073 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CXCR4P61073 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.92■□□□□ 0.62
CXCR4P61073 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CXCR4P61073 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CXCR4P61073 AC010141.3-201ENST00000456659 717 ntBASIC18.92■□□□□ 0.62
CXCR4P61073 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CXCR4P61073 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC18.92■□□□□ 0.62
CXCR4P61073 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC18.92■□□□□ 0.62
CXCR4P61073 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC18.92■□□□□ 0.62
CXCR4P61073 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC18.92■□□□□ 0.62
CXCR4P61073 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC18.92■□□□□ 0.62
CXCR4P61073 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CXCR4P61073 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.92■□□□□ 0.62
CXCR4P61073 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.92■□□□□ 0.62
CXCR4P61073 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CXCR4P61073 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CXCR4P61073 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CXCR4P61073 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
CXCR4P61073 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CXCR4P61073 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CXCR4P61073 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.91■□□□□ 0.62
CXCR4P61073 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CXCR4P61073 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CXCR4P61073 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CXCR4P61073 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CXCR4P61073 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC18.91■□□□□ 0.62
CXCR4P61073 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC18.91■□□□□ 0.62
CXCR4P61073 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CXCR4P61073 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CXCR4P61073 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CXCR4P61073 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.91■□□□□ 0.62
CXCR4P61073 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CXCR4P61073 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.91■□□□□ 0.62
CXCR4P61073 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
CXCR4P61073 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CXCR4P61073 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.9■□□□□ 0.62
CXCR4P61073 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC18.9■□□□□ 0.62
CXCR4P61073 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
CXCR4P61073 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.9■□□□□ 0.62
CXCR4P61073 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CXCR4P61073 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.9■□□□□ 0.62
CXCR4P61073 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CXCR4P61073 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC18.9■□□□□ 0.62
CXCR4P61073 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CXCR4P61073 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CXCR4P61073 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CXCR4P61073 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CXCR4P61073 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
CXCR4P61073 AP004607.7-201ENST00000527152 1677 ntBASIC18.89■□□□□ 0.61
CXCR4P61073 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.89■□□□□ 0.61
CXCR4P61073 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CXCR4P61073 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CXCR4P61073 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CXCR4P61073 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CXCR4P61073 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CXCR4P61073 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CXCR4P61073 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CXCR4P61073 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CXCR4P61073 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CXCR4P61073 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CXCR4P61073 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CXCR4P61073 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CXCR4P61073 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CXCR4P61073 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CXCR4P61073 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
CXCR4P61073 SRD5A1P1-201ENST00000442297 786 ntBASIC18.88■□□□□ 0.61
CXCR4P61073 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC18.88■□□□□ 0.61
CXCR4P61073 MIR3621-201ENST00000580529 85 ntBASIC18.88■□□□□ 0.61
CXCR4P61073 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC18.88■□□□□ 0.61
CXCR4P61073 AC092171.4-201ENST00000609130 632 ntBASIC18.88■□□□□ 0.61
CXCR4P61073 RASSF1-AS1-201ENST00000629828 790 ntBASIC18.88■□□□□ 0.61
CXCR4P61073 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.88■□□□□ 0.61
CXCR4P61073 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CXCR4P61073 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
CXCR4P61073 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC18.88■□□□□ 0.61
CXCR4P61073 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CXCR4P61073 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms